Endosymbiotic theories for eukaryote origin

WF Martin, S Garg, V Zimorski - … Transactions of the …, 2015 - royalsocietypublishing.org
For over 100 years, endosymbiotic theories have figured in thoughts about the differences
between prokaryotic and eukaryotic cells. More than 20 different versions of endosymbiotic …

Group II introns: mobile ribozymes that invade DNA

AM Lambowitz, S Zimmerly - Cold Spring Harbor …, 2011 - cshperspectives.cshlp.org
Group II introns are mobile ribozymes that self-splice from precursor RNAs to yield excised
intron lariat RNAs, which then invade new genomic DNA sites by reverse splicing. The …

Endogenous retroviruses promote homeostatic and inflammatory responses to the microbiota

DS Lima-Junior, SR Krishnamurthy, N Bouladoux… - Cell, 2021 - cell.com
The microbiota plays a fundamental role in regulating host immunity. However, the
processes involved in the initiation and regulation of immunity to the microbiota remain …

Comparative genomic analyses reveal a vast, novel network of nucleotide-centric systems in biological conflicts, immunity and signaling

AM Burroughs, D Zhang, DE Schäffer… - Nucleic acids …, 2015 - academic.oup.com
Cyclic di-and linear oligo-nucleotide signals activate defenses against invasive nucleic
acids in animal immunity; however, their evolutionary antecedents are poorly understood …

The ClosTron: a universal gene knock-out system for the genus Clostridium

JT Heap, OJ Pennington, ST Cartman, GP Carter… - Journal of …, 2007 - Elsevier
Progress in exploiting clostridial genome information has been severely impeded by a
general lack of effective methods for the directed inactivation of specific genes. Those few …

Homing endonuclease structure and function

BL Stoddard - Quarterly reviews of biophysics, 2005 - cambridge.org
Homing endonucleases are encoded by open reading frames that are embedded within
group I, group II and archael introns, as well as inteins (intervening sequences that are …

Homing endonucleases: structural and functional insight into the catalysts of intron/intein mobility

BS Chevalier, BL Stoddard - Nucleic acids research, 2001 - academic.oup.com
Homing endonucleases confer mobility to their host intervening sequence, either an intron
or intein, by catalyzing a highly specific double-strand break in a cognate allele lacking the …

Mobile group II introns

AM Lambowitz, S Zimmerly - Annu. Rev. Genet., 2004 - annualreviews.org
▪ Abstract Mobile group II introns, found in bacterial and organellar genomes, are both
catalytic RNAs and retrotransposable elements. They use an extraordinary mobility …

High Persister Mutants in Mycobacterium tuberculosis

HL Torrey, I Keren, LE Via, JS Lee, K Lewis - PLoS One, 2016 - journals.plos.org
Mycobacterium tuberculosis forms drug-tolerant persister cells that are the probable cause
of its recalcitrance to antibiotic therapy. While genetically identical to the rest of the …

Reverse Transcriptase-Mediated Tropism Switching in Bordetella Bacteriophage

M Liu, R Deora, SR Doulatov, M Gingery, FA Eiserling… - Science, 2002 - science.org
Host-pathogen interactions are often driven by mechanisms that promote genetic variability.
We have identified a group of temperate bacteriophages that generate diversity in a gene …