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Association map** in plants in the post-GWAS genomics era
PK Gupta, PL Kulwal, V Jaiswal - Advances in genetics, 2019 - Elsevier
With the availability of DNA-based molecular markers during early 1980s and that of
sophisticated statistical tools in late 1980s and later, it became possible to identify genomic …
sophisticated statistical tools in late 1980s and later, it became possible to identify genomic …
Integration of multi-omics technologies for crop improvement: status and prospects
R Zhang, C Zhang, C Yu, J Dong, J Hu - Frontiers in Bioinformatics, 2022 - frontiersin.org
With the rapid development of next-generation sequencing (NGS), multi-omics techniques
have been emerging as effective approaches for crop improvement. Here, we focus mainly …
have been emerging as effective approaches for crop improvement. Here, we focus mainly …
Genome-wide differences in DNA methylation changes in two contrasting rice genotypes in response to drought conditions
W Wang, Q Qin, F Sun, Y Wang, D Xu, Z Li… - Frontiers in plant …, 2016 - frontiersin.org
Differences in drought stress tolerance within diverse rice genotypes have been attributed to
genetic diversity and epigenetic alterations. DNA methylation is an important epigenetic …
genetic diversity and epigenetic alterations. DNA methylation is an important epigenetic …
Physiological and de novo transcriptome analysis of the fermentation mechanism of Cerasus sachalinensis roots in response to short-term waterlogging
P Zhang, D Lyu, L Jia, J He, S Qin - BMC genomics, 2017 - Springer
Background Cerasus sachalinensis is widely used in cool regions as a sweet cherry
rootstock and is known for its sensitivity to soil waterlogging and waterlogging stress …
rootstock and is known for its sensitivity to soil waterlogging and waterlogging stress …
Transposon-mediated epigenetic regulation contributes to phenotypic diversity and environmental adaptation in rice
X Song, X Cao - Current Opinion in Plant Biology, 2017 - Elsevier
Highlights•Most rice genes are associated with transposable elements (TEs).•TE-based
epigenetic regulation of expression of adjacent genes is prevalent in rice.•Environmental …
epigenetic regulation of expression of adjacent genes is prevalent in rice.•Environmental …
Exploiting genic male sterility in rice: from molecular dissection to breeding applications
A Abbas, P Yu, L Sun, Z Yang, D Chen… - Frontiers in Plant …, 2021 - frontiersin.org
Rice (Oryza sativa L.) occupies a very salient and indispensable status among cereal crops,
as its vast production is used to feed nearly half of the world's population. Male sterile plants …
as its vast production is used to feed nearly half of the world's population. Male sterile plants …
Comparative transcriptomic and evolutionary analysis of FAD-like genes of Brassica species revealed their role in fatty acid biosynthesis and stress tolerance
Abstract Background Fatty acid desaturases (FADs) are involved in regulating plant fatty
acid composition by adding double bonds to growing hydrocarbon chain. Apart from …
acid composition by adding double bonds to growing hydrocarbon chain. Apart from …
[HTML][HTML] Genome-wide analysis of DNA polymorphisms, the methylome and transcriptome revealed that multiple factors are associated with low pollen fertility in …
Autotetraploid rice is a useful germplasm with high biomass production; however, low fertility
is the main barrier in commercial utilization. In our previous study, differential expression of …
is the main barrier in commercial utilization. In our previous study, differential expression of …
Epigenetic regulation and epigenomic landscape in rice
X Deng, X Song, L Wei, C Liu, X Cao - National Science Review, 2016 - academic.oup.com
Epigenetic regulation has been implicated in the control of complex agronomic traits in rice
(Oryza sativa), a staple food crop and model monocot plant. Recent advances in high …
(Oryza sativa), a staple food crop and model monocot plant. Recent advances in high …
Genome-wide comparative transcriptome analysis of CMS-D2 and its maintainer and restorer lines in upland cotton
Background Cytoplasmic male sterility (CMS) conferred by the cytoplasm from Gossypium
harknessii (D2) is an important system for hybrid seed production in Upland cotton (G …
harknessii (D2) is an important system for hybrid seed production in Upland cotton (G …