Mechanisms and regulation of RNA condensation in RNP granule formation

D Tauber, G Tauber, R Parker - Trends in biochemical sciences, 2020 - cell.com
Ribonucleoprotein (RNP) granules are RNA–protein assemblies that are involved in
multiple aspects of RNA metabolism and are linked to memory, development, and disease …

[HTML][HTML] Emergence and adaptation of the cellular machinery directing antigenic variation in the African trypanosome

J Faria, EM Briggs, JA Black, R McCulloch - Current opinion in …, 2022 - Elsevier
Survival of the African trypanosome within its mammalian hosts, and hence transmission
between hosts, relies upon antigenic variation, where stochastic changes in the composition …

[HTML][HTML] Modulation of RNA condensation by the DEAD-box protein eIF4A

D Tauber, G Tauber, A Khong, B Van Treeck, J Pelletier… - Cell, 2020 - cell.com
Stress granules are condensates of non-translating mRNAs and proteins involved in the
stress response and neurodegenerative diseases. Stress granules form in part through …

UPF1 promotes the formation of R loops to stimulate DNA double-strand break repair

GHP Ngo, JW Grimstead, DM Baird - Nature communications, 2021 - nature.com
DNA-RNA hybrid structures have been detected at the vicinity of DNA double-strand breaks
(DSBs) occurring within transcriptional active regions of the genome. The induction of DNA …

N6-Methyladenosine-modified lncRNA LINREP promotes Glioblastoma progression by recruiting the PTBP1/HuR complex

X Ji, Z Liu, J Gao, X Bing, D He, W Liu… - Cell Death & …, 2023 - nature.com
Glioblastoma multiforme (GBM) is acknowledged as the most aggressive primary brain
tumor in adults. It is typically characterized by the high heterogeneity which corresponds to …

Nonsense-mediated RNA decay factor UPF1 is critical for posttranscriptional and translational gene regulation in Arabidopsis

VK Raxwal, CG Simpson, J Gloggnitzer, JC Entinze… - Plant Cell, 2020 - academic.oup.com
Nonsense-mediated RNA decay (NMD) is an RNA control mechanism that has also been
implicated in the broader regulation of gene expression. Nevertheless, a role for NMD in …

Survey of the binding preferences of RNA-binding proteins to RNA editing events

X Hu, Q Zou, L Yao, X Yang - Genome biology, 2022 - Springer
Background Adenosine-to-inosine (A-to-I) editing is an important RNA posttranscriptional
process related to a multitude of cellular and molecular activities. However, systematic …

Tau‐induced deficits in nonsense‐mediated mRNA decay contribute to neurodegeneration

G Zuniga, S Levy, P Ramirez, J De Mange… - Alzheimer's & …, 2023 - Wiley Online Library
Introduction While brains of patients with Alzheimer's disease and related tauopathies have
evidence of altered RNA processing, we lack a mechanistic understanding of how altered …

UPF1-mediated RNA decay—Danse Macabre in a cloud

D Lavysh, G Neu-Yilik - Biomolecules, 2020 - mdpi.com
Nonsense-mediated RNA decay (NMD) is the prototype example of a whole family of RNA
decay pathways that unfold around a common central effector protein called UPF1. While …

The biological functions of nonsense-mediated mRNA decay in plants: RNA quality control and beyond

VK Raxwal, K Riha - Biochemical Society Transactions, 2023 - portlandpress.com
Nonsense-mediated mRNA decay (NMD) is an evolutionarily conserved quality control
pathway that inhibits the expression of transcripts containing premature termination codon …