Insights from genomes into the evolutionary importance and prevalence of hybridization in nature

SA Taylor, EL Larson - Nature ecology & evolution, 2019‏ - nature.com
Hybridization is an evolutionary phenomenon that has fascinated biologists for centuries.
Prior to the advent of whole-genome sequencing, it was clear that hybridization had played …

[HTML][HTML] Eco-evolutionary genomics of chromosomal inversions

M Wellenreuther, L Bernatchez - Trends in ecology & evolution, 2018‏ - cell.com
Chromosomal inversions have long fascinated evolutionary biologists due to their
suppression of recombination, which can protect co-adapted alleles. Emerging research …

Chromosomal inversion polymorphisms shape the genomic landscape of deer mice

OS Harringmeyer, HE Hoekstra - Nature Ecology & Evolution, 2022‏ - nature.com
Chromosomal inversions are an important form of structural variation that can affect
recombination, chromosome structure and fitness. However, because inversions can be …

SyRI: finding genomic rearrangements and local sequence differences from whole-genome assemblies

M Goel, H Sun, WB Jiao, K Schneeberger - Genome biology, 2019‏ - Springer
Genomic differences range from single nucleotide differences to complex structural
variations. Current methods typically annotate sequence differences ranging from SNPs to …

Making sense of genomic islands of differentiation in light of speciation

JBW Wolf, H Ellegren - Nature Reviews Genetics, 2017‏ - nature.com
As populations diverge, genetic differences accumulate across the genome. Spurred by
rapid developments in sequencing technology, genome-wide population surveys of natural …

Mutation load at a mimicry supergene sheds new light on the evolution of inversion polymorphisms

P Jay, M Chouteau, A Whibley, H Bastide… - Nature …, 2021‏ - nature.com
Chromosomal inversions are ubiquitous in genomes and often coordinate complex
phenotypes, such as the covariation of behavior and morphology in many birds, fishes …

Sex-dependent dominance maintains migration supergene in rainbow trout

DE Pearse, NJ Barson, T Nome, G Gao… - Nature ecology & …, 2019‏ - nature.com
Males and females often differ in their fitness optima for shared traits that have a shared
genetic basis, leading to sexual conflict. Morphologically differentiated sex chromosomes …

Regulatory changes in pterin and carotenoid genes underlie balanced color polymorphisms in the wall lizard

P Andrade, C Pinho… - Proceedings of the …, 2019‏ - National Acad Sciences
Reptiles use pterin and carotenoid pigments to produce yellow, orange, and red colors.
These conspicuous colors serve a diversity of signaling functions, but their molecular basis …

Supergene origin and maintenance in Atlantic cod

M Matschiner, JMI Barth, OK Tørresen, B Star… - Nature Ecology & …, 2022‏ - nature.com
Supergenes are sets of genes that are inherited as a single marker and encode complex
phenotypes through their joint action. They are identified in an increasing number of …

What have we learned from the first 500 avian genomes?

GA Bravo, CJ Schmitt… - Annual Review of Ecology …, 2021‏ - annualreviews.org
The increased capacity of DNA sequencing has significantly advanced our understanding of
the phylogeny of birds and the proximate and ultimate mechanisms molding their genomic …