Epigenetics, DNA damage, and aging
C Soto-Palma, LJ Niedernhofer… - The Journal of …, 2022 - Am Soc Clin Investig
Over the course of a human lifespan, genome integrity erodes, leading to an increased
abundance of several types of chromatin changes. The abundance of DNA lesions …
abundance of several types of chromatin changes. The abundance of DNA lesions …
Chromatin and nucleosome dynamics in DNA damage and repair
Chromatin is organized into higher-order structures that form subcompartments in
interphase nuclei. Different categories of specialized enzymes act on chromatin and …
interphase nuclei. Different categories of specialized enzymes act on chromatin and …
Comprehensive map** of histone modifications at DNA double-strand breaks deciphers repair pathway chromatin signatures
Double-strand breaks (DSBs) are extremely detrimental DNA lesions that can lead to cancer-
driving mutations and translocations. Non-homologous end joining (NHEJ) and homologous …
driving mutations and translocations. Non-homologous end joining (NHEJ) and homologous …
Liquid demixing of intrinsically disordered proteins is seeded by poly (ADP-ribose)
Intrinsically disordered proteins can phase separate from the soluble intracellular space,
and tend to aggregate under pathological conditions. The physiological functions and …
and tend to aggregate under pathological conditions. The physiological functions and …
How cells ensure correct repair of DNA double-strand breaks
J Her, SF Bunting - Journal of Biological Chemistry, 2018 - ASBMB
DNA double-strand breaks (DSBs) arise regularly in cells and when left unrepaired cause
senescence or cell death. Homologous recombination (HR) and nonhomologous end …
senescence or cell death. Homologous recombination (HR) and nonhomologous end …
Variants of core histones and their roles in cell fate decisions, development and cancer
M Buschbeck, SB Hake - Nature reviews Molecular cell biology, 2017 - nature.com
Histone variants endow chromatin with unique properties and show a specific genomic
distribution that is regulated by specific deposition and removal machineries. These variants …
distribution that is regulated by specific deposition and removal machineries. These variants …
SIRT7 is a histone desuccinylase that functionally links to chromatin compaction and genome stability
L Li, L Shi, S Yang, R Yan, D Zhang, J Yang… - Nature …, 2016 - nature.com
Although SIRT7 is a member of sirtuin family proteins that are described as NAD+-
dependent class III histone deacetylases, the intrinsic enzymatic activity of this sirtuin protein …
dependent class III histone deacetylases, the intrinsic enzymatic activity of this sirtuin protein …
BRCA2 controls DNA: RNA hybrid level at DSBs by mediating RNase H2 recruitment
DNA double-strand breaks (DSBs) are toxic DNA lesions, which, if not properly repaired,
may lead to genomic instability, cell death and senescence. Damage-induced long non …
may lead to genomic instability, cell death and senescence. Damage-induced long non …
The replication checkpoint prevents two types of fork collapse without regulating replisome stability
The ATR replication checkpoint ensures that stalled forks remain stable when replisome
movement is impeded. Using an improved iPOND protocol combined with SILAC mass …
movement is impeded. Using an improved iPOND protocol combined with SILAC mass …
PARP1 links CHD2-mediated chromatin expansion and H3. 3 deposition to DNA repair by non-homologous end-joining
MS Luijsterburg, I de Krijger, WW Wiegant, RG Shah… - Molecular cell, 2016 - cell.com
The response to DNA double-strand breaks (DSBs) requires alterations in chromatin
structure to promote the assembly of repair complexes on broken chromosomes. Non …
structure to promote the assembly of repair complexes on broken chromosomes. Non …