Mitochondrial metagenomics: letting the genes out of the bottle

A Crampton-Platt, DW Yu, X Zhou, AP Vogler - GigaScience, 2016 - academic.oup.com
Abstract 'Mitochondrial metagenomics'(MMG) is a methodology for shotgun sequencing of
total DNA from specimen mixtures and subsequent bioinformatic extraction of mitochondrial …

The beetle tree of life reveals that C oleoptera survived end‐P ermian mass extinction to diversify during the C retaceous terrestrial revolution

DD Mckenna, AL Wild, K Kanda… - Systematic …, 2015 - Wiley Online Library
Here we present a phylogeny of beetles (I nsecta: C oleoptera) based on DNA sequence
data from eight nuclear genes, including six single‐copy nuclear protein‐coding genes, for …

Introducing BASE: the Biomes of Australian Soil Environments soil microbial diversity database

A Bissett, A Fitzgerald, T Meintjes, PM Mele, F Reith… - GigaScience, 2016 - Springer
Background Microbial inhabitants of soils are important to ecosystem and planetary
functions, yet there are large gaps in our knowledge of their diversity and ecology. The …

How to sequence and annotate insect mitochondrial genomes for systematic and comparative genomics research

S Cameron - Systematic Entomology, 2014 - eprints.qut.edu.au
Over the past decade the mitochondrial (mt) genome has become the most widely used
genomic resource available for systematic entomology. While the availability of other types …

Higher‐level phylogeny of longhorn beetles (Coleoptera: Chrysomeloidea) inferred from mitochondrial genomes

R Nie, AP Vogler, XK Yang, M Lin - Systematic Entomology, 2021 - Wiley Online Library
Cerambycidae (longhorn beetles) and related families in the superfamily Chrysomeloidea
are important components of forest ecosystems and play a key role in nutrient cycling and …

Bulk de novo mitogenome assembly from pooled total DNA elucidates the phylogeny of weevils (Coleoptera: Curculionoidea)

CPDT Gillett, A Crampton-Platt… - Molecular biology …, 2014 - academic.oup.com
Complete mitochondrial genomes have been shown to be reliable markers for phylogeny
reconstruction among diverse animal groups. However, the relative difficulty and high cost …

Mitochondrial phylogenomics illuminates the evolutionary history of Neuropterida

Y Wang, X Liu, IJ Garzón‐Orduña, SL Winterton… - …, 2017 - Wiley Online Library
Neuroptera (lacewings) and allied orders Megaloptera (dobsonflies, alderflies) and
Raphidioptera (snakeflies) are predatory insects and together make up the clade …

Why barcode? High-throughput multiplex sequencing of mitochondrial genomes for molecular systematics

MJTN Timmermans, S Dodsworth… - Nucleic acids …, 2010 - academic.oup.com
Mitochondrial genome sequences are important markers for phylogenetics but taxon
sampling remains sporadic because of the great effort and cost required to acquire full …

Characterization of 67 mitochondrial tRNA gene rearrangements in the Hymenoptera suggests that mitochondrial tRNA gene position is selectively neutral

M Dowton, SL Cameron, JI Dowavic… - Molecular Biology …, 2009 - academic.oup.com
We present entire sequences of two hymenopteran mitochondrial genomes and the major
portion of three others. We combined these data with nine previously sequenced …

The phylogeny of leaf beetles (Chrysomelidae) inferred from mitochondrial genomes

R Nie, C Andújar, C Gómez‐Rodríguez… - Systematic …, 2020 - Wiley Online Library
The high‐level classification of Chrysomelidae (leaf beetles) currently recognizes 12 or 13
well‐established subfamilies, but the phylogenetic relationships among them remain …