The transformational role of GPU computing and deep learning in drug discovery

M Pandey, M Fernandez, F Gentile, O Isayev… - Nature Machine …, 2022 - nature.com
Deep learning has disrupted nearly every field of research, including those of direct
importance to drug discovery, such as medicinal chemistry and pharmacology. This …

Artificial intelligence for natural product drug discovery

MW Mullowney, KR Duncan, SS Elsayed… - Nature Reviews Drug …, 2023 - nature.com
Developments in computational omics technologies have provided new means to access
the hidden diversity of natural products, unearthing new potential for drug discovery. In …

A benchmark study of deep learning-based multi-omics data fusion methods for cancer

D Leng, L Zheng, Y Wen, Y Zhang, L Wu, J Wang… - Genome biology, 2022 - Springer
Background A fused method using a combination of multi-omics data enables a
comprehensive study of complex biological processes and highlights the interrelationship of …

[HTML][HTML] First fully-automated AI/ML virtual screening cascade implemented at a drug discovery centre in Africa

G Turon, J Hlozek, JG Woodland, A Kumar… - Nature …, 2023 - nature.com
Streamlined data-driven drug discovery remains challenging, especially in resource-limited
settings. We present ZairaChem, an artificial intelligence (AI)-and machine learning (ML) …

NPASS database update 2023: quantitative natural product activity and species source database for biomedical research

H Zhao, Y Yang, S Wang, X Yang, K Zhou… - Nucleic Acids …, 2023 - academic.oup.com
Quantitative activity and species source data of natural products (NPs) are important for drug
discovery, medicinal plant research, and microbial investigations. Activity values of NPs …

[HTML][HTML] Using chemical and biological data to predict drug toxicity

A Liu, S Seal, H Yang, A Bender - SLAS Discovery, 2023 - Elsevier
Various sources of information can be used to better understand and predict compound
activity and safety-related endpoints, including biological data such as gene expression and …

Connecting chemistry and biology through molecular descriptors

A Fernández-Torras, A Comajuncosa-Creus… - Current Opinion in …, 2022 - Elsevier
Through the representation of small molecule structures as numerical descriptors and the
exploitation of the similarity principle, chemoinformatics has made paramount contributions …

EDC-predictor: a novel strategy for prediction of endocrine-disrupting chemicals by integrating pharmacological and toxicological profiles

Z Yu, Z Wu, M Zhou, K Cao, W Li, G Liu… - … Science & Technology, 2023 - ACS Publications
Identification of endocrine-disrupting chemicals (EDCs) is crucial in the reduction of human
health risks. However, it is hard to do so because of the complex mechanisms of the EDCs …

Advancing targeted protein degradation via multiomics profiling and artificial intelligence

M Duran-Frigola, M Cigler… - Journal of the American …, 2023 - ACS Publications
Only around 20% of the human proteome is considered to be druggable with small-molecule
antagonists. This leaves some of the most compelling therapeutic targets outside the reach …

A practical guide to the discovery of biomolecules with biostimulant activity

J Li, R Lardon, S Mangelinckx… - Journal of Experimental …, 2024 - academic.oup.com
The growing demand for sustainable solutions in agriculture, which are critical for crop
productivity and food quality in the face of climate change and the need to reduce …