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Identification of bioactive metabolites using activity metabolomics
The metabolome, the collection of small-molecule chemical entities involved in metabolism,
has traditionally been studied with the aim of identifying biomarkers in the diagnosis and …
has traditionally been studied with the aim of identifying biomarkers in the diagnosis and …
Epigenetic-sensitive pathways in personalized therapy of major cardiovascular diseases
The complex pathobiology underlying cardiovascular diseases (CVDs) has yet to be
explained. Aberrant epigenetic changes may result from alterations in enzymatic activities …
explained. Aberrant epigenetic changes may result from alterations in enzymatic activities …
[HTML][HTML] Tuft-cell-derived leukotrienes drive rapid anti-helminth immunity in the small intestine but are dispensable for anti-protist immunity
JW McGinty, HA Ting, TE Billipp, MS Nadjsombati… - Immunity, 2020 - cell.com
Helminths, allergens, and certain protists induce type 2 immune responses, but the
underlying mechanisms of immune activation remain poorly understood. In the small …
underlying mechanisms of immune activation remain poorly understood. In the small …
Breast cancer quantitative proteome and proteogenomic landscape
HJ Johansson, F Socciarelli, NM Vacanti… - Nature …, 2019 - nature.com
In the preceding decades, molecular characterization has revolutionized breast cancer (BC)
research and therapeutic approaches. Presented herein, an unbiased analysis of breast …
research and therapeutic approaches. Presented herein, an unbiased analysis of breast …
Integrated analysis of shotgun proteomic data with PatternLab for proteomics 4.0
PatternLab for proteomics is an integrated computational environment that unifies several
previously published modules for the analysis of shotgun proteomic data. The contained …
previously published modules for the analysis of shotgun proteomic data. The contained …
Deep thermal profiling for detection of functional proteoform groups
The complexity of the functional proteome extends considerably beyond the coding genome,
resulting in millions of proteoforms. Investigation of proteoforms and their functional roles is …
resulting in millions of proteoforms. Investigation of proteoforms and their functional roles is …
[HTML][HTML] Gut microbiota changes and its potential relations with thyroid carcinoma
X Yu, W Jiang, RO Kosik, Y Song, Q Luo, T Qiao… - Journal of advanced …, 2022 - Elsevier
Introduction Emerging evidence suggests that the essence of life is the ecological balance of
the neural, endocrine, metabolic, microbial, and immune systems. Gut microbiota have been …
the neural, endocrine, metabolic, microbial, and immune systems. Gut microbiota have been …
Anatomy and evolution of database search engines—a central component of mass spectrometry based proteomic workflows
K Verheggen, H Ræder, FS Berven… - Mass spectrometry …, 2020 - Wiley Online Library
Sequence database search engines are bioinformatics algorithms that identify peptides from
tandem mass spectra using a reference protein sequence database. Two decades of …
tandem mass spectra using a reference protein sequence database. Two decades of …
Create, run, share, publish, and reference your LC–MS, FIA–MS, GC–MS, and NMR data analysis workflows with the Workflow4Metabolomics 3.0 Galaxy online …
Metabolomics is a key approach in modern functional genomics and systems biology. Due
to the complexity of metabolomics data, the variety of experimental designs, and the …
to the complexity of metabolomics data, the variety of experimental designs, and the …
The exon-junction complex helicase eIF4A3 controls cell fate via coordinated regulation of ribosome biogenesis and translational output
Eukaryotic initiation factor 4A-III (eIF4A3), a core helicase component of the exon junction
complex, is essential for splicing, mRNA trafficking, and nonsense-mediated decay …
complex, is essential for splicing, mRNA trafficking, and nonsense-mediated decay …