The epitranscriptome beyond m6A

D Wiener, S Schwartz - Nature Reviews Genetics, 2021 - nature.com
Following its transcription, RNA can be modified by> 170 chemically distinct types of
modifications—the epitranscriptome. In recent years, there have been substantial efforts to …

Ten things you should know about transposable elements

G Bourque, KH Burns, M Gehring, V Gorbunova… - Genome biology, 2018 - Springer
Transposable elements (TEs) are major components of eukaryotic genomes. However, the
extent of their impact on genome evolution, function, and disease remain a matter of intense …

Functional long non-coding RNAs evolve from junk transcripts

AF Palazzo, EV Koonin - Cell, 2020 - cell.com
Transcriptome studies reveal pervasive transcription of complex genomes, such as those of
mammals. Despite popular arguments for functionality of most, if not all, of these transcripts …

Satellite DNA: an evolving topic

MA Garrido-Ramos - Genes, 2017 - mdpi.com
Satellite DNA represents one of the most fascinating parts of the repetitive fraction of the
eukaryotic genome. Since the discovery of highly repetitive tandem DNA in the 1960s, a lot …

Evolution and implications of de novo genes in humans

LA Broeils, J Ruiz-Orera, B Snel, N Hubner… - Nature ecology & …, 2023 - nature.com
Genes and translated open reading frames (ORFs) that emerged de novo from previously
non-coding sequences provide species with opportunities for adaptation. When aberrantly …

Long noncoding RNAs in plants

AT Wierzbicki, T Blevins… - Annual Review of Plant …, 2021 - annualreviews.org
Plants have an extraordinary diversity of transcription machineries, including five nuclear
DNA-dependent RNA polymerases. Four of these enzymes are dedicated to the production …

Non-coding genetic variants in human disease

F Zhang, JR Lupski - Human molecular genetics, 2015 - academic.oup.com
Genetic variants, including single-nucleotide variants (SNVs) and copy number variants
(CNVs), in the non-coding regions of the human genome can play an important role in …

Regulation of mammalian nucleotide metabolism and biosynthesis

AN Lane, TWM Fan - Nucleic acids research, 2015 - academic.oup.com
Nucleotides are required for a wide variety of biological processes and are constantly
synthesized de novo in all cells. When cells proliferate, increased nucleotide synthesis is …

What do you mean,“epigenetic”?

C Deans, KA Maggert - Genetics, 2015 - academic.oup.com
Interest in the field of epigenetics has increased rapidly over the last decade, with the term
becoming more identifiable in biomedical research, scientific fields outside of the molecular …

The bioenergetic costs of a gene

M Lynch, GK Marinov - Proceedings of the National Academy of Sciences, 2015 - pnas.org
An enduring mystery of evolutionary genomics concerns the mechanisms responsible for
lineage-specific expansions of genome size in eukaryotes, especially in multicellular …