[PDF][PDF] Progress on microbial species diversity, community assembly and functional traits

C Gao, LD Guo - Biodiversity Science, 2022 - biodiversity-science.net
Background: Microbes, collectively bacteria, fungi, archaea, and viruses, are the organisms
that are widely distributed on earth, with a huge number of individuals and high diversity of …

Adaptive expression of phage auxiliary metabolic genes in paddy soils and their contribution toward global carbon sequestration

D Zhu, SY Liu, MM Sun, XY Yi, GL Duan, M Ye… - Proceedings of the …, 2024 - pnas.org
Habitats with intermittent flooding, such as paddy soils, are crucial reservoirs in the global
carbon pool; however, the effect of phage–host interactions on the biogeochemical cycling …

The microbiome of cryospheric ecosystems

M Bourquin, SB Busi, S Fodelianakis, H Peter… - Nature …, 2022 - nature.com
The melting of the cryosphere is among the most conspicuous consequences of climate
change, with impacts on microbial life and related biogeochemistry. However, we are …

Genomic and metabolic adaptations of biofilms to ecological windows of opportunity in glacier-fed streams

SB Busi, M Bourquin, S Fodelianakis… - Nature …, 2022 - nature.com
In glacier-fed streams, ecological windows of opportunity allow complex microbial biofilms to
develop and transiently form the basis of the food web, thereby controlling key ecosystem …

Diversity and biogeography of the bacterial microbiome in glacier-fed streams

L Ezzat, H Peter, M Bourquin, SB Busi, G Michoud… - Nature, 2025 - nature.com
The rapid melting of mountain glaciers and the vanishing of their streams is emblematic of
climate change,. Glacier-fed streams (GFSs) are cold, oligotrophic and unstable ecosystems …

Benthic biofilms in glacier-fed streams from Scandinavia to the Himalayas host distinct bacterial communities compared with the streamwater

L Ezzat, S Fodelianakis, TJ Kohler… - Applied and …, 2022 - journals.asm.org
Microbial life in glacier-fed streams (GFSs) is dominated by benthic biofilms which fulfill
critical ecosystem processes. However, it remains unclear how the bacterial communities of …

Spatial patterns of benthic biofilm diversity among streams draining proglacial floodplains

J Brandani, H Peter, SB Busi, TJ Kohler… - Frontiers in …, 2022 - frontiersin.org
Glacier shrinkage opens new proglacial terrain with pronounced environmental gradients
along longitudinal and lateral chronosequences. Despite the environmental harshness of …

Glacier shrinkage will accelerate downstream decomposition of organic matter and alters microbiome structure and function

TJ Kohler, S Fodelianakis, G Michoud… - Global Change …, 2022 - Wiley Online Library
The shrinking of glaciers is among the most iconic consequences of climate change. Despite
this, the downstream consequences for ecosystem processes and related microbiome …

Unexpected functional diversity of stream biofilms within and across proglacial floodplains despite close spatial proximity

G Michoud, TJ Kohler, H Peter… - Limnology and …, 2023 - Wiley Online Library
High‐mountain streams are particularly vulnerable to climate change because they
intimately interface with the cryosphere. As glaciers shrink and snowpack diminishes …

Changes of putative pathogenic species within the water bacterial community in large-scale drinking water treatment and distribution systems

B Zhao, R Liu, Y Li, H Xu, X Li, J Gu, X Zhang, Y Wang… - Water Research, 2024 - Elsevier
Although the management of microbes in drinking water is of paramount importance for
public health, there remain challenges in comprehensively examining pathogenic bacteria …