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Situating ecology as a big-data science: Current advances, challenges, and solutions
Ecology has joined a world of big data. Two complementary frameworks define big data:
data that exceed the analytical capacities of individuals or disciplines or the “Four Vs” axes …
data that exceed the analytical capacities of individuals or disciplines or the “Four Vs” axes …
Inferring microbiota functions from taxonomic genes: a review
Deciphering microbiota functions is crucial to predict ecosystem sustainability in response to
global change. High-throughput sequencing at the individual or community level has …
global change. High-throughput sequencing at the individual or community level has …
Integrated metagenomics and molecular ecological network analysis of bacterial community composition during the phytoremediation of cadmium-contaminated soils …
Z Chen, Y Zheng, C Ding, X Ren, J Yuan, F Sun… - … and environmental safety, 2017 - Elsevier
Two energy crops (maize and soybean) were used in the remediation of cadmium-
contaminated soils. These crops were used because they are fast growing, have a large …
contaminated soils. These crops were used because they are fast growing, have a large …
Model microbial consortia as tools for understanding complex microbial communities
A major biological challenge in the postgenomic era has been untangling the composition
and functions of microbes that inhabit complex communities or microbiomes. Multi-omics …
and functions of microbes that inhabit complex communities or microbiomes. Multi-omics …
An integrated, modular approach to data science education in microbiology
We live in an increasingly data-driven world, where high-throughput sequencing and mass
spectrometry platforms are transforming biology into an information science. This has shifted …
spectrometry platforms are transforming biology into an information science. This has shifted …
Metabolic pathway inference using multi-label classification with rich pathway features
Metabolic inference from genomic sequence information is a necessary step in determining
the capacity of cells to make a living in the world at different levels of biological organization …
the capacity of cells to make a living in the world at different levels of biological organization …