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Software engineering for computational science: Past, present, future
Despite the increasing importance of in silico experiments to the scientific discovery process,
state-of-the-art software engineering practices are rarely adopted in computational science …
state-of-the-art software engineering practices are rarely adopted in computational science …
Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition)1
DJ Klionsky, AK Abdel-Aziz, S Abdelfatah, M Abdellatif… - autophagy, 2021 - Taylor & Francis
In 2008, we published the first set of guidelines for standardizing research in autophagy.
Since then, this topic has received increasing attention, and many scientists have entered …
Since then, this topic has received increasing attention, and many scientists have entered …
[HTML][HTML] Guidelines for the use and interpretation of assays for monitoring autophagy 1
DJ Klionsky, AK Abdel-Aziz, S Abdelfatah… - …, 2021 - pmc.ncbi.nlm.nih.gov
In 2008, we published the first set of guidelines for standardizing research in autophagy.
Since then, this topic has received increasing attention, and many scientists have entered …
Since then, this topic has received increasing attention, and many scientists have entered …
Best practices for making reproducible biochemical models
Like many scientific disciplines, dynamical biochemical modeling is hindered by
irreproducible results. This limits the utility of biochemical models by making them difficult to …
irreproducible results. This limits the utility of biochemical models by making them difficult to …
Domain-specific architectures: Research problems and promising approaches
Process technology-driven performance and energy efficiency improvements have slowed
down as we approach physical design limits. General-purpose manycore architectures …
down as we approach physical design limits. General-purpose manycore architectures …
[KNIHA][B] Towards Bayesian model-based demography: Agency, complexity and uncertainty in migration studies
J Bijak - 2022 - library.oapen.org
This open access book presents a ground-breaking approach to develo** micro-
foundations for demography and migration studies. It offers a unique and novel methodology …
foundations for demography and migration studies. It offers a unique and novel methodology …
Validity frame–enabled model-based engineering processes
Model-based systems engineering (MBSE) focuses on using models to support the design,
optimization, simulation, and ultimately deployment of complex cyber-physical systems …
optimization, simulation, and ultimately deployment of complex cyber-physical systems …
Tellurium notebooks—an environment for reproducible dynamical modeling in systems biology
The considerable difficulty encountered in reproducing the results of published dynamical
models limits validation, exploration and reuse of this increasingly large biomedical …
models limits validation, exploration and reuse of this increasingly large biomedical …
Context, Composition, Automation, and Communication: The C2AC Roadmap for Modeling and Simulation
Simulation has become, in many application areas, a sine qua non. Most recently, COVID-
19 has underlined the importance of simulation studies and limitations in current practices …
19 has underlined the importance of simulation studies and limitations in current practices …
Trustworthy agent-based simulation: the case for domain-specific modelling languages
Simulation is a key tool for researching complex system behaviour. Agent-based simulation
has been applied across domains, such as biology, health, economics and urban sciences …
has been applied across domains, such as biology, health, economics and urban sciences …