Guidelines for DNA taxonomy, with a focus on the meiofauna

D Fontaneto, JF Flot, CQ Tang - Marine Biodiversity, 2015 - Springer
Describing biological diversity is a challenging endeavour, especially for the small, cryptic
animals that make up the meiofauna. The field of DNA taxonomy, ie, the use of DNA to …

Using DNA barcoding to improve invasive pest identification at US ports-of-entry

MJL Madden, RG Young, JW Brown, SE Miller… - PLoS …, 2019 - journals.plos.org
Interception of potential invasive species at ports-of-entry is essential for effective biosecurity
and biosurveillance programs. However, taxonomic assessment of the immature stages of …

Using eDNA to biomonitor the fish community in a tropical oligotrophic lake

M Valdez-Moreno, NV Ivanova, M Elías-Gutiérrez… - Plos one, 2019 - journals.plos.org
Environmental DNA (eDNA) is an effective approach for detecting vertebrates and plants,
especially in aquatic ecosystems, but prior studies have largely examined eDNA in cool …

DNA Barcoding Reveals High Cryptic Diversity in the North Eurasian Moina Species (Crustacea: Cladocera)

EI Bekker, DP Karabanov, YR Galimov, AA Kotov - PloS one, 2016 - journals.plos.org
Species of the genus Moina Baird (Cladocera: Moinidae) often dominate freshwater
crustacean communities in temporary water bodies. Several species of Moina are used as …

Phylogeography of Daphnia magna Straus (Crustacea: Cladocera) in Northern Eurasia: Evidence for a deep longitudinal split between mitochondrial lineages

EI Bekker, DP Karabanov, YR Galimov, CR Haag… - PloS one, 2018 - journals.plos.org
Species with a large geographic distributions present a challenge for phylogeographic
studies due to logistic difficulties of obtaining adequate sampling. For instance, in most …

Performance comparison of genetic markers for high‐throughput sequencing‐based biodiversity assessment in complex communities

A Zhan, SA Bailey, DD Heath… - Molecular ecology …, 2014 - Wiley Online Library
Metabarcode surveys of DNA extracted from environmental samples are increasingly
popular for biodiversity assessment in natural communities. Such surveys rely heavily on …

Relevance of DNA barcodes for biomonitoring of freshwater animals

M Elías-Gutiérrez, M Valdez-Moreno - Frontiers in Environmental …, 2023 - frontiersin.org
The COI gene, colloquially named the DNA barcode, is a universal marker for species
identification in the animal kingdom. Nevertheless, due to the taxonomic impediment, there …

Phylogeography of the Chydorus sphaericus Group (Cladocera: Chydoridae) in the Northern Palearctic

AA Kotov, DP Karabanov, EI Bekker, TV Neretina… - PLoS …, 2016 - journals.plos.org
The biodiversity and the biogeography are still poorly understood for freshwater
invertebrates. The crustacean Chydorus sphaericus-brevilabris complex (Cladocera …

Improved protocols to accelerate the assembly of DNA barcode reference libraries for freshwater zooplankton

M Elías‐Gutiérrez, M Valdez‐Moreno… - Ecology and …, 2018 - Wiley Online Library
Currently, freshwater zooplankton sampling and identification methodologies have
remained virtually unchanged since they were first established in the beginning of the XX …

Nematicidal action of Clonostachys rosea against Meloidogyne incognita: in-vitro and in-silico analyses

G Nagaraj, R Kannan, T Raguchander… - Journal of Taibah …, 2024 - Taylor & Francis
Clonostachys rosea is a biocontrol agent against a wide range of pests and diseases. In the
present study, an in-vitro nematicidal activity of C. rosea has been documented by observing …