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Tandem repeats lead to sequence assembly errors and impose multi-level challenges for genome and protein databases
The widespread occurrence of repetitive stretches of DNA in genomes of organisms across
the tree of life imposes fundamental challenges for sequencing, genome assembly, and …
the tree of life imposes fundamental challenges for sequencing, genome assembly, and …
Environmental effects of offshore produced water discharges: A review focused on the Norwegian continental shelf
Produced water (PW), a large byproduct of offshore oil and gas extraction, is reinjected to
formations or discharged to the sea after treatment. The discharges contain dispersed crude …
formations or discharged to the sea after treatment. The discharges contain dispersed crude …
Supergene origin and maintenance in Atlantic cod
Supergenes are sets of genes that are inherited as a single marker and encode complex
phenotypes through their joint action. They are identified in an increasing number of …
phenotypes through their joint action. They are identified in an increasing number of …
[HTML][HTML] Major histocompatibility complex (MHC) genes and disease resistance in fish
Fascinating about classical major histocompatibility complex (MHC) molecules is their
polymorphism. The present study is a review and discussion of the fish MHC situation. The …
polymorphism. The present study is a review and discussion of the fish MHC situation. The …
Stabilizing selection on Atlantic cod supergenes through a millennium of extensive exploitation
Life on Earth has been characterized by recurring cycles of ecological stasis and disruption,
relating biological eras to geological and climatic transitions through the history of our …
relating biological eras to geological and climatic transitions through the history of our …
Teleost genomic repeat landscapes in light of diversification rates and ecology
Repetitive DNA make up a considerable fraction of most eukaryotic genomes. In fish,
transposable element (TE) activity has coincided with rapid species diversification. Here, we …
transposable element (TE) activity has coincided with rapid species diversification. Here, we …
The round goby genome provides insights into mechanisms that may facilitate biological invasions
Background The invasive benthic round goby (Neogobius melanostomus) is the most
successful temperate invasive fish and has spread in aquatic ecosystems on both sides of …
successful temperate invasive fish and has spread in aquatic ecosystems on both sides of …
Single-cell transcriptome profiling of immune cell repertoire of the Atlantic cod which naturally lacks the major histocompatibility class II system
The Atlantic cod's unusual immune system, entirely lacking the Major Histocompatibility
class II pathway, has prompted intriguing questions about what mechanisms are used to …
class II pathway, has prompted intriguing questions about what mechanisms are used to …
Genome-wide identification and analysis of NOD-like receptors and their potential roles in response to Edwardsiella tarda infection in black rockfish (Sebastes …
NLR (NOD-like receptor) is a large class of cytoplasmic family protein that belonging to the
pattern recognition receptors (PRRs), which exerts autoimmune activities by detecting …
pattern recognition receptors (PRRs), which exerts autoimmune activities by detecting …
A tale of two fish: Comparative transcriptomics of resistant and susceptible steelhead following exposure to Ceratonova shasta highlights differences in parasite …
DE Barrett, JL Bartholomew - PLoS One, 2021 - journals.plos.org
Diseases caused by myxozoan parasites represent a significant threat to the health of
salmonids in both the wild and aquaculture setting, and there are no effective therapeutants …
salmonids in both the wild and aquaculture setting, and there are no effective therapeutants …