Biological invasions, climate change, and genomics

SL Chown, KA Hodgins, PC Griffin - Crop Breeding, 2016 - taylorfrancis.com
Biological invasions constitute a major environmental change driver, affecting conservation,
agriculture and human health. Invasive alien species (IAS) impacts include, alterations of …

The genetics of drought tolerance in conifers

E Moran, J Lauder, C Musser, A Stathos… - New …, 2017 - Wiley Online Library
As temperatures warm and precipitation patterns shift as a result of climate change, interest
in the identification of tree genotypes that will thrive under more arid conditions has grown …

Convergent local adaptation to climate in distantly related conifers

S Yeaman, KA Hodgins, KE Lotterhos, H Suren… - Science, 2016 - science.org
When confronted with an adaptive challenge, such as extreme temperature, closely related
species frequently evolve similar phenotypes using the same genes. Although such …

Insights into conifer giga-genomes

AR De La Torre, I Birol, J Bousquet… - Plant …, 2014 - academic.oup.com
Insights from sequenced genomes of major land plant lineages have advanced research in
almost every aspect of plant biology. Until recently, however, assembled genome …

Advances in ecological genomics in forest trees and applications to genetic resources conservation and breeding

JA Holliday, SN Aitken, JEK Cooke, B Fady… - 2017 - Wiley Online Library
Forest trees are an unparalleled group of organisms in their combined ecological, economic
and societal importance. With widespread distributions, predominantly random mating …

Evaluating genomic data for management of local adaptation in a changing climate: A lodgepole pine case study

CR Mahony, IR MacLachlan, BM Lind… - Evolutionary …, 2020 - Wiley Online Library
We evaluate genomic data, relative to phenotypic and climatic data, as a basis for assisted
gene flow and genetic conservation. Using a seedling common garden trial of 281 …

RADseq approaches and applications for forest tree genetics

TL Parchman, JP Jahner, KA Uckele… - Tree Genetics & …, 2018 - Springer
As tree species vary extensively in genome size, complexity, and resource development,
reduced representation methods have been increasingly employed for the generation of …

Somatic mutations substantially increase the per-generation mutation rate in the conifer Picea sitchensis

VCT Hanlon, SP Otto, SN Aitken - Evolution letters, 2019 - academic.oup.com
The rates and biological significance of somatic mutations have long been a subject of
debate. Somatic mutations in plants are expected to accumulate with vegetative growth and …

Conifer genomics and adaptation: at the crossroads of genetic diversity and genome function

J Prunier, JP Verta, JJ MacKay - New Phytologist, 2016 - Wiley Online Library
Conifers have been understudied at the genomic level despite their worldwide ecological
and economic importance but the situation is rapidly changing with the development of next …

Exome capture from the spruce and pine giga‐genomes

H Suren, KA Hodgins, S Yeaman… - Molecular ecology …, 2016 - Wiley Online Library
Sequence capture is a flexible tool for generating reduced representation libraries,
particularly in species with massive genomes. We used an exome capture approach to …