The clinical utility of integrative genomics in childhood cancer extends beyond targetable mutations

A Villani, S Davidson, N Kanwar, WW Lo, Y Li… - Nature cancer, 2023 - nature.com
We conducted integrative somatic–germline analyses by deeply sequencing 864 cancer-
associated genes, complete genomes and transcriptomes for 300 mostly previously treated …

Germ line predisposition variants occur in myelodysplastic syndrome patients of all ages

S Feurstein, AM Trottier, N Estrada-Merly… - Blood, The Journal …, 2022 - ashpublications.org
The frequency of pathogenic/likely pathogenic (P/LP) germ line variants in patients with
myelodysplastic syndrome (MDS) diagnosed at age 40 years or less is 15% to 20 …

Specifications of the ACMG/AMP variant interpretation guidelines for germline TP53 variants

C Fortuno, K Lee, M Olivier, T Pesaran, PL Mai… - Human …, 2021 - Wiley Online Library
Germline pathogenic variants in TP53 are associated with Li‐Fraumeni syndrome, a cancer
predisposition disorder inherited in an autosomal dominant pattern associated with a high …

Prospective pan-cancer germline testing using MSK-IMPACT informs clinical translation in 751 patients with pediatric solid tumors

EM Fiala, G Jayakumaran, A Mauguen, JA Kennedy… - Nature cancer, 2021 - nature.com
The spectrum of germline predisposition in pediatric cancer continues to be realized. Here
we report 751 patients with solid tumors who underwent prospective matched tumor–normal …

Evolving significance of tumor-normal sequencing in cancer care

D Mandelker, O Ceyhan-Birsoy - Trends in cancer, 2020 - cell.com
Molecular tests assist at various stages of cancer patient management, including providing
diagnosis, predicting prognosis, identifying therapeutic targets, and determining hereditary …

Feasibility of whole genome and transcriptome profiling in pediatric and young adult cancers

N Shukla, MF Levine, G Gundem, D Domenico… - Nature …, 2022 - nature.com
The utility of cancer whole genome and transcriptome sequencing (cWGTS) in oncology is
increasingly recognized. However, implementation of cWGTS is challenged by the need to …

Role of POLE and POLD1 in familial cancer

P Mur, S García-Mulero, J Del Valle… - Genetics in …, 2020 - nature.com
Purpose Germline pathogenic variants in the exonuclease domain (ED) of polymerases
POLE and POLD1 predispose to adenomatous polyps, colorectal cancer (CRC) …

Discovery through clinical sequencing in oncology

MTA Donoghue, AM Schram, DM Hyman, BS Taylor - Nature cancer, 2020 - nature.com
The molecular characterization of tumors now informs clinical cancer care for many patients.
This advent of molecular oncology has been driven by the expanding number of therapeutic …

[HTML][HTML] The clinical genome resource (ClinGen): advancing genomic knowledge through global curation

EF Andersen, DR Azzariti, L Babb, JS Berg… - Genetics in …, 2025 - Elsevier
Abstract The Clinical Genome Resource (ClinGen) is a National Institutes of Health-funded
program founded 10 years ago that defines the clinical relevance of genes and variants for …