Mass spectrometry–based proteomics and metaproteomics have long been used in the
study of human microbiomes, with the potential of metaproteomics only recently being fully …

Background By analyzing the proteins which are the workhorses of biological systems,
metaproteomics allows us to list the taxa present in any microbiota, monitor their relative …

In metaproteomics studies, constructing a reference protein sequence database that is both
comprehensive and not overly large is critical for the peptide identification step. Therefore …

The human gut microbiome is closely associated with human health and diseases.
Metaproteomics has emerged as a valuable tool for studying the functionality of the gut …

Introduction Metaproteomics offers insights into the function of complex microbial
communities, while it is also capable of revealing microbe–microbe and host–microbe …

The diversity and complexity of the microbiome's genomic landscape are not always
mirrored in its proteomic profile. Despite the anticipated proteomic diversity, observed …

Background Microbiomes, especially within the gut, are complex and may comprise
hundreds of species. The identification of peptides in metaproteomics presents a significant …

Metaproteomics studies the collective protein composition of complex microbial
communities, providing insights into microbial roles in various environments. Despite its …

Metaproteomics has emerged as a powerful tool for studying human gut microbiomes.
However, the intricate nature of these microbial communities often surpasses the analytical …