[HTML][HTML] Multi-omics of the gut microbial ecosystem in inflammatory bowel diseases

J Lloyd-Price, C Arze, AN Ananthakrishnan… - Nature, 2019 - nature.com
Inflammatory bowel diseases, which include Crohn's disease and ulcerative colitis, affect
several million individuals worldwide. Crohn's disease and ulcerative colitis are complex …

Drinking water nitrate and human health: an updated review

MH Ward, RR Jones, JD Brender, TM De Kok… - International journal of …, 2018 - mdpi.com
Nitrate levels in our water resources have increased in many areas of the world largely due
to applications of inorganic fertilizer and animal manure in agricultural areas. The regulatory …

Identifying biases and their potential solutions in human microbiome studies

JT Nearing, AM Comeau, MGI Langille - Microbiome, 2021 - Springer
Advances in DNA sequencing technology have vastly improved the ability of researchers to
explore the microbial inhabitants of the human body. Unfortunately, while these studies have …

[HTML][HTML] The microbiome and irritable bowel syndrome–a review on the pathophysiology, current research and future therapy

PP Chong, VK Chin, CY Looi, WF Wong… - Frontiers in …, 2019 - frontiersin.org
Irritable bowel syndrome (IBS) is a functional disorder which affects a large proportion of the
population globally. The precise etiology of IBS is still unknown, although consensus …

Optimizing methods and dodging pitfalls in microbiome research

D Kim, CE Hofstaedter, C Zhao, L Mattei, C Tanes… - Microbiome, 2017 - Springer
Research on the human microbiome has yielded numerous insights into health and disease,
but also has resulted in a wealth of experimental artifacts. Here, we present suggestions for …

[HTML][HTML] Microbiome in cancer: Role in carcinogenesis and impact in therapeutic strategies

MM Rahman, MR Islam, S Shohag, MT Ahasan… - Biomedicine & …, 2022 - Elsevier
Cancer is the world's second-leading cause of death, and the involvement of microbes in a
range of diseases, including cancer, is well established. The gut microbiota is known to play …

Microbiome 101: studying, analyzing, and interpreting gut microbiome data for clinicians

C Allaband, D McDonald, Y Vázquez-Baeza… - Clinical …, 2019 - Elsevier
Advances in technical capabilities for reading complex human microbiomes are leading to
an explosion of microbiome research, leading in turn to intense interest among clinicians in …

[PDF][PDF] Practical considerations for large-scale gut microbiome studies

D Vandeputte, RY Tito, R Vanleeuwen… - FEMS microbiology …, 2017 - academic.oup.com
First insights on the human gut microbiome have been gained from medium-sized, cross-
sectional studies. However, given the modest portion of explained variance of currently …

[HTML][HTML] Optimization of fecal sample processing for microbiome study—The journey from bathroom to bench

WK Wu, CC Chen, S Panyod, RA Chen, MS Wu… - Journal of the Formosan …, 2019 - Elsevier
Although great interest has been displayed by researchers in the contribution of gut
microbiota to human health, there is still no standard protocol with consensus to guarantee …

A clinician's guide to microbiome analysis

MJ Claesson, AG Clooney, PW O'toole - … Reviews Gastroenterology & …, 2017 - nature.com
Microbiome analysis involves determining the composition and function of a community of
microorganisms in a particular location. For the gastroenterologist, this technology opens up …