DNA sequence-based identification of Fusarium: Current status and future directions

K O'Donnell, TJ Ward, VARG Robert, PW Crous… - Phytoparasitica, 2015 - Springer
Fusarium ranks as one of the world's most economically destructive and species-rich groups
of mycotoxigenic plant pathogens (Aoki et al. 2014). These ubiquitous molds produce a …

A comprehensive phylogeny of birds (Aves) using targeted next-generation DNA sequencing

RO Prum, JS Berv, A Dornburg, DJ Field, JP Townsend… - Nature, 2015 - nature.com
Although reconstruction of the phylogeny of living birds has progressed tremendously in the
last decade, the evolutionary history of Neoaves—a clade that encompasses nearly all living …

A multigene phylogeny toward a new phylogenetic classification of Leotiomycetes

PR Johnston, L Quijada, CA Smith, HO Baral, T Hosoya… - IMA fungus, 2019 - Springer
Fungi in the class Leotiomycetes are ecologically diverse, including mycorrhizas,
endophytes of roots and leaves, plant pathogens, aquatic and aero-aquatic hyphomycetes …

The sections of Alternaria: formalizing species-group concepts

DP Lawrence, PB Gannibal, TL Peever, BM Pryor - Mycologia, 2013 - Taylor & Francis
The systematics of Alternaria and allied genera traditionally has been based on the
characteristics of conidia and the sporulation apparatus. This emphasis on morphology in …

A phylogenomic solution to the origin of insects by resolving crustacean-hexapod relationships

M Schwentner, DJ Combosch, JP Nelson, G Giribet - Current Biology, 2017 - cell.com
Insects, the most diverse group of organisms, are nested within crustaceans, arguably the
most abundant group of marine animals. However, to date, no consensus has been reached …

Insights into the genus Diaporthe: phylogenetic species delimitation in the D. eres species complex

D Udayanga, LA Castlebury, AY Rossman… - Fungal Diversity, 2014 - Springer
The genus Diaporthe comprises pathogenic, endophytic and saprobic species with both
temperate and tropical distributions. Cryptic diversification, phenotypic plasticity and …

Evolution of lacewings and allied orders using anchored phylogenomics (N europtera, M egaloptera, R aphidioptera)

SL Winterton, AR Lemmon, JP Gillung… - Systematic …, 2018 - Wiley Online Library
Abstract Analysis of anchored hybrid enrichment (AHE) data under a variety of analytical
parameters for a broadly representative sample of taxa (136 species representing all extant …

Phylogenetic and phylogenomic overview of the Polyporales

M Binder, A Justo, R Riley, A Salamov… - Mycologia, 2013 - Taylor & Francis
We present a phylogenetic and phylogenomic overview of the Polyporales. The newly
sequenced genomes of Bjerkandera adusta, Ganoderma sp., and Phlebia brevispora are …

Avoiding missing data biases in phylogenomic inference: an empirical study in the landfowl (Aves: Galliformes)

PA Hosner, BC Faircloth, TC Glenn… - Molecular biology …, 2016 - academic.oup.com
Production of massive DNA sequence data sets is transforming phylogenetic inference, but
best practices for analyzing such data sets are not well established. One uncertainty is …