Staphylococcus aureus host interactions and adaptation

BP Howden, SG Giulieri, T Wong Fok Lung… - Nature Reviews …, 2023 - nature.com
Invasive Staphylococcus aureus infections are common, causing high mortality,
compounded by the propensity of the bacterium to develop drug resistance. S. aureus is an …

Proliferating active matter

O Hallatschek, SS Datta, K Drescher, J Dunkel… - Nature Reviews …, 2023 - nature.com
The fascinating patterns of collective motion created by autonomously driven particles have
fuelled active-matter research for over two decades. So far, theoretical active-matter …

Diversity within species: interpreting strains in microbiomes

T Van Rossum, P Ferretti, OM Maistrenko… - Nature Reviews …, 2020 - nature.com
Studying within-species variation has traditionally been limited to culturable bacterial
isolates and low-resolution microbial community fingerprinting. Metagenomic sequencing …

Spatial structure, cooperation and competition in biofilms

CD Nadell, K Drescher, KR Foster - Nature Reviews Microbiology, 2016 - nature.com
Bacteria often live within matrix-embedded communities, termed biofilms, which are now
understood to be a major mode of microbial life. The study of biofilms has revealed their vast …

The ecology and evolution of microbial competition

M Ghoul, S Mitri - Trends in microbiology, 2016 - cell.com
Microbes are typically surrounded by different strains and species with whom they compete
for scarce nutrients and limited space. Given such challenging living conditions, microbes …

The evolution of short-and long-range weapons for bacterial competition

SC Booth, WPJ Smith, KR Foster - Nature Ecology & Evolution, 2023 - nature.com
Bacteria possess a diverse range of mechanisms for inhibiting competitors, including
bacteriocins, tailocins, type VI secretion systems and contact-dependent inhibition (CDI) …

Spatiotemporal microbial evolution on antibiotic landscapes

M Baym, TD Lieberman, ED Kelsic, R Chait, R Gross… - Science, 2016 - science.org
A key aspect of bacterial survival is the ability to evolve while migrating across spatially
varying environmental challenges. Laboratory experiments, however, often study evolution …

Morphological instability and roughening of growing 3D bacterial colonies

A Martínez-Calvo, T Bhattacharjee, RK Bay… - Proceedings of the …, 2022 - pnas.org
How do growing bacterial colonies get their shapes? While colony morphogenesis is well
studied in two dimensions, many bacteria grow as large colonies in three-dimensional (3D) …

Non-reciprocity across scales in active mixtures

A Dinelli, J O'Byrne, A Curatolo, Y Zhao… - Nature …, 2023 - nature.com
In active matter, particles typically experience mediated interactions, which are not
constrained by Newton's third law and are therefore generically non-reciprocal. Non …

Predicting evolution

M Lässig, V Mustonen, AM Walczak - Nature ecology & evolution, 2017 - nature.com
The face of evolutionary biology is changing: from reconstructing and analysing the past to
predicting future evolutionary processes. Recent developments include prediction of …