Targets and assays for discovering novel antibacterial agents

S Donadio, L Carrano, L Brandi, S Serina… - Journal of …, 2002 - Elsevier
The increasing frequency of nosocomial infections due to multi-resistant pathogens exerts a
significant toll and calls for novel and better antibiotics. Different approaches can be used in …

Cleavage of the A site mRNA codon during ribosome pausing provides a mechanism for translational quality control

CS Hayes, RT Sauer - Molecular cell, 2003 - cell.com
Cells employ many mechanisms to ensure quality control during protein biosynthesis. Here,
we show that, during the pausing of a bacterial ribosome, the mRNA being translated is …

Aminoglycoside activity observed on single pre-translocation ribosome complexes

MB Feldman, DS Terry, RB Altman… - Nature chemical …, 2010 - nature.com
Aminoglycoside-class antibiotics bind directly to ribosomal RNA, imparting pleiotropic effects
on ribosome function. Despite in-depth structural investigations of aminoglycoside–RNA …

Coupling of drug protonation to the specific binding of aminoglycosides to the A site of 16 S rRNA: elucidation of the number of drug amino groups involved and their …

M Kaul, CM Barbieri, JE Kerrigan, DS Pilch - Journal of molecular biology, 2003 - Elsevier
2-Deoxystreptamine (2-DOS) aminoglycoside antibiotics bind specifically to the central
region of the 16S rRNA A site and interfere with protein synthesis. Recently, we have shown …

Trans-translation and protein synthesis inhibitors

A Vioque, J de la Cruz - FEMS microbiology letters, 2003 - academic.oup.com
Trans-translation is a process found in all bacteria, which contributes to the release of
ribosomes that are stalled through a variety of causes, for example when the 3′ end of a …

Chemically related 4, 5-linked aminoglycoside antibiotics drive subunit rotation in opposite directions

MR Wasserman, A Pulk, Z Zhou, RB Altman… - Nature …, 2015 - nature.com
Dynamic remodelling of intersubunit bridge B2, a conserved RNA domain of the bacterial
ribosome connecting helices 44 (h44) and 69 (H69) of the small and large subunit …

The Ribosome-Bound Chaperones RAC and Ssb1/2p Are Required for Accurate Translation in Saccharomyces cerevisiae

M Rakwalska, S Rospert - Molecular and cellular biology, 2004 - Taylor & Francis
The chaperone homologs RAC (ribosome-associated complex) and Ssb1/2p are anchored
to ribosomes; Ssb1/2p directly interacts with nascent polypeptides. The absence of RAC or …

SsrA‐mediated protein tagging in the presence of miscoding drugs and its physiological role in Escherichia coli

T Abo, K Ueda, T Sunohara, K Ogawa, H Aiba - Genes to Cells, 2002 - Wiley Online Library
Background: We have shown recently that read‐through of a normal stop codon by a
suppressor tRNA in specific genes possessing a Rho‐independent terminator leads to SsrA …

[КНИГА][B] Reviews of Physiology, Biochemistry and Pharmacology 158

SG Amara, E Bamberg, B Fleischmann, T Gudermann… - 2007 - books.google.com
Contents EI Christensen and R. Nielsen: Role of Megalin and Cubilin in Renal Physiology
and Pathophysiology G. Zifarelli and M. Pusch: CLC Chloride Channels and Transporters: A …

FRET enabled real time detection of RNA-small molecule binding

Y **e, AV Dix, Y Tor - Journal of the American Chemical Society, 2009 - ACS Publications
A robust analysis and discovery platform for antibiotics targeting the bacterial rRNA A-site
has been developed by incorporating a new emissive U surrogate into the RNA and labeling …