Using haplotype information for conservation genomics
The particular combinations of alleles that define haplotypes along individual chromosomes
can be determined with increasing ease and accuracy by using current sequencing …
can be determined with increasing ease and accuracy by using current sequencing …
A practical introduction to sequentially Markovian coalescent methods for estimating demographic history from genomic data
A common goal of population genomics and molecular ecology is to reconstruct the
demographic history of a species of interest. A pair of powerful tools based on the …
demographic history of a species of interest. A pair of powerful tools based on the …
On the importance of being structured: instantaneous coalescence rates and human evolution—lessons for ancestral population size inference?
Most species are structured and influenced by processes that either increased or reduced
gene flow between populations. However, most population genetic inference methods …
gene flow between populations. However, most population genetic inference methods …
Inferring population size history from large samples of genome-wide molecular data-an approximate Bayesian computation approach
Inferring the ancestral dynamics of effective population size is a long-standing question in
population genetics, which can now be tackled much more accurately thanks to the massive …
population genetics, which can now be tackled much more accurately thanks to the massive …
Contemporary demographic reconstruction methods are robust to genome assembly quality: a case study in Tasmanian devils
Reconstructing species' demographic histories is a central focus of molecular ecology and
evolution. Recently, an expanding suite of methods leveraging either the sequentially …
evolution. Recently, an expanding suite of methods leveraging either the sequentially …
Squamate reptiles challenge paradigms of genomic repeat element evolution set by birds and mammals
Broad paradigms of vertebrate genomic repeat element evolution have been largely shaped
by analyses of mammalian and avian genomes. Here, based on analyses of genomes …
by analyses of mammalian and avian genomes. Here, based on analyses of genomes …
An overview of current population genomics methods for the analysis of whole‐genome resequencing data in eukaryotes
Characterizing the population history of a species and identifying loci underlying local
adaptation is crucial in functional ecology, evolutionary biology, conservation and …
adaptation is crucial in functional ecology, evolutionary biology, conservation and …
Spatiotemporal landscape genetics: Investigating ecology and evolution through space and time
LE Fenderson, AI Kovach, B Llamas - Molecular Ecology, 2020 - Wiley Online Library
Genetic time‐series data from historical samples greatly facilitate inference of past
population dynamics and species evolution. Yet, although climate and landscape change …
population dynamics and species evolution. Yet, although climate and landscape change …
The roles of introgression and climate change in the rise to dominance of Acropora corals
Reef-building corals provide the structural basis for one of Earth's most spectacular and
diverse—but increasingly threatened—ecosystems. Modern Indo-Pacific reefs are …
diverse—but increasingly threatened—ecosystems. Modern Indo-Pacific reefs are …
The IICR (inverse instantaneous coalescence rate) as a summary of genomic diversity: insights into demographic inference and model choice
Several inferential methods using genomic data have been proposed to quantify and date
population size changes in the history of species. At the same time an increasing number of …
population size changes in the history of species. At the same time an increasing number of …