Electrodiffusion phenomena in neuroscience and the nernst–planck–poisson equations

JJ Jasielec - Electrochem, 2021 - mdpi.com
This work is aimed to give an electrochemical insight into the ionic transport phenomena in
the cellular environment of organized brain tissue. The Nernst–Planck–Poisson (NPP) …

The boundedness-by-entropy method for cross-diffusion systems

A Jüngel - Nonlinearity, 2015 - iopscience.iop.org
The global-in-time existence of bounded weak solutions to a large class of physically
relevant, strongly coupled parabolic systems exhibiting a formal gradient-flow structure is …

Mean field games with nonlinear mobilities in pedestrian dynamics

M Burger, M Di Francesco, P Markowich… - arxiv preprint arxiv …, 2013 - arxiv.org
In this paper we present an optimal control approach modeling fast exit scenarios in
pedestrian crowds. In particular we consider the case of a large human crowd trying to exit a …

Efficient, positive, and energy stable schemes for multi-D Poisson–Nernst–Planck systems

H Liu, W Maimaitiyiming - Journal of Scientific Computing, 2021 - Springer
In this paper, we design, analyze, and numerically validate positive and energy-dissipating
schemes for solving the time-dependent multi-dimensional system of Poisson–Nernst …

Inverse problems in ion channel modelling

M Burger - Inverse Problems, 2011 - iopscience.iop.org
This paper reviews several inverse problems related to biological ion channels and polymer
nanopores. Different problems arise at different scales and thus lead to different inversion …

IonMonger 2.0: software for free, fast and versatile simulation of current, voltage and impedance response of planar perovskite solar cells

W Clarke, LJ Bennett, Y Grudeva, JM Foster… - Journal of …, 2023 - Springer
The second generation of the open-source MATLAB-based software tool IonMonger, for
solving drift–diffusion models of charge transport in planar perovskite solar cells, is …

[HTML][HTML] Analysis of degenerate cross-diffusion population models with volume filling

N Zamponi, A Jüngel - Annales de l'Institut Henri Poincaré C, Analyse Non …, 2017 - Elsevier
A class of parabolic cross-diffusion systems modeling the interaction of an arbitrary number
of population species is analyzed in a bounded domain with no-flux boundary conditions …

Accurate modeling of a biological nanopore with an extended continuum framework

K Willems, D Ruić, FLR Lucas, U Barman, N Verellen… - Nanoscale, 2020 - pubs.rsc.org
Despite the broad success of biological nanopores as powerful instruments for the analysis
of proteins and nucleic acids at the single-molecule level, a fast simulation methodology to …

Multiscale analysis of the effect of surface charge pattern on a nanopore's rectification and selectivity properties: From all-atom model to Poisson-Nernst-Planck

M Valiskó, B Matejczyk, Z Ható, T Kristóf… - The Journal of …, 2019 - pubs.aip.org
We report a multiscale modeling study for charged cylindrical nanopores using three
modeling levels that include (1) an all-atom explicit-water model studied with molecular …

From random walks on networks to nonlinear diffusion

C Falcó - Physical Review E, 2022 - APS
Mathematical models of motility are often based on random-walk descriptions of discrete
individuals that can move according to certain rules. It is usually the case that large masses …