Advances in multimodal data fusion in neuroimaging: Overview, challenges, and novel orientation

YD Zhang, Z Dong, SH Wang, X Yu, X Yao, Q Zhou… - Information …, 2020 - Elsevier
Multimodal fusion in neuroimaging combines data from multiple imaging modalities to
overcome the fundamental limitations of individual modalities. Neuroimaging fusion can …

Multi-atlas segmentation of biomedical images: a survey

JE Iglesias, MR Sabuncu - Medical image analysis, 2015 - Elsevier
Abstract Multi-atlas segmentation (MAS), first introduced and popularized by the pioneering
work of Rohlfing, et al.(2004), Klein, et al.(2005), and Heckemann, et al.(2006), is becoming …

Mindboggling morphometry of human brains

A Klein, SS Ghosh, FS Bao, J Giard… - PLoS computational …, 2017 - journals.plos.org
Mindboggle (http://mindboggle. info) is an open source brain morphometry platform that
takes in preprocessed T1-weighted MRI data and outputs volume, surface, and tabular data …

A fully convolutional neural network for cardiac segmentation in short-axis MRI

PV Tran - arxiv preprint arxiv:1604.00494, 2016 - arxiv.org
Automated cardiac segmentation from magnetic resonance imaging datasets is an essential
step in the timely diagnosis and management of cardiac pathologies. We propose to tackle …

101 labeled brain images and a consistent human cortical labeling protocol

A Klein, J Tourville - Frontiers in neuroscience, 2012 - frontiersin.org
We introduce the Mindboggle-101 dataset, the largest and most complete set of free,
publicly accessible, manually labeled human brain images. To manually label the …

Deep neural networks for anatomical brain segmentation

A de Brebisson, G Montana - … of the IEEE conference on computer …, 2015 - cv-foundation.org
We present a novel approach to automatically segment magnetic resonance (MR) images of
the human brain into anatomical regions. Our methodology is based on a deep artificial …

Evaluation of 14 nonlinear deformation algorithms applied to human brain MRI registration

A Klein, J Andersson, BA Ardekani, J Ashburner… - Neuroimage, 2009 - Elsevier
All fields of neuroscience that employ brain imaging need to communicate their results with
reference to anatomical regions. In particular, comparative morphometry and group analysis …

Construction of a 3D probabilistic atlas of human cortical structures

DW Shattuck, M Mirza, V Adisetiyo, C Hojatkashani… - Neuroimage, 2008 - Elsevier
We describe the construction of a digital brain atlas composed of data from manually
delineated MRI data. A total of 56 structures were labeled in MRI of 40 healthy, normal …

A review of atlas-based segmentation for magnetic resonance brain images

M Cabezas, A Oliver, X Lladó, J Freixenet… - Computer methods and …, 2011 - Elsevier
Normal and abnormal brains can be segmented by registering the target image with an
atlas. Here, an atlas is defined as the combination of an intensity image (template) and its …

[HTML][HTML] An evaluation of volume-based morphometry for prediction of mild cognitive impairment and Alzheimer's disease

D Schmitter, A Roche, B Maréchal, D Ribes… - NeuroImage: Clinical, 2015 - Elsevier
Voxel-based morphometry from conventional T1-weighted images has proved effective to
quantify Alzheimer's disease (AD) related brain atrophy and to enable fairly accurate …