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Mining genomes to illuminate the specialized chemistry of life
All organisms produce specialized organic molecules, ranging from small volatile chemicals
to large gene-encoded peptides, that have evolved to provide them with diverse cellular and …
to large gene-encoded peptides, that have evolved to provide them with diverse cellular and …
Microbial chassis engineering drives heterologous production of complex secondary metabolites
The cryptic secondary metabolite biosynthetic gene clusters (BGCs) far outnumber currently
known secondary metabolites. Heterologous production of secondary metabolite BGCs in …
known secondary metabolites. Heterologous production of secondary metabolite BGCs in …
Precise DNA cleavage using CRISPR-SpRYgests
Methods for in vitro DNA cleavage and molecular cloning remain unable to precisely cleave
DNA directly adjacent to bases of interest. Restriction enzymes (REs) must bind specific …
DNA directly adjacent to bases of interest. Restriction enzymes (REs) must bind specific …
Activating cryptic biosynthetic gene cluster through a CRISPR–Cas12a-mediated direct cloning approach
M Liang, L Liu, F Xu, X Zeng, R Wang… - Nucleic Acids …, 2022 - academic.oup.com
Direct cloning of biosynthetic gene clusters (BGCs) from microbial genomes facilitates
natural product-based drug discovery. Here, by combining Cas12a and the advanced …
natural product-based drug discovery. Here, by combining Cas12a and the advanced …
Genome mining unveils a class of ribosomal peptides with two amino termini
The era of inexpensive genome sequencing and improved bioinformatics tools has
reenergized the study of natural products, including the ribosomally synthesized and post …
reenergized the study of natural products, including the ribosomally synthesized and post …
Recent advances in genome mining and synthetic biology for discovery and biosynthesis of natural products
M Wang, L Chen, Z Zhang, Q Wang - Critical Reviews in …, 2025 - Taylor & Francis
Natural products have long served as critical raw materials in chemical and pharmaceutical
manufacturing, primarily which can provide superior scaffolds or intermediates for drug …
manufacturing, primarily which can provide superior scaffolds or intermediates for drug …
Biology and applications of CRISPR–Cas12 and transposon-associated homologs
CRISPR-associated Cas12 proteins are a highly variable collection of nucleic acid-targeting
proteins. All Cas12 variants use RNA guides and a single nuclease domain to target …
proteins. All Cas12 variants use RNA guides and a single nuclease domain to target …
Non-modular fatty acid synthases yield distinct N-terminal acylation in ribosomal peptides
Recent efforts in genome mining of ribosomally synthesized and post-translationally
modified peptides (RiPPs) have expanded the diversity of post-translational modification …
modified peptides (RiPPs) have expanded the diversity of post-translational modification …
Activating natural product synthesis using CRISPR interference and activation systems in Streptomyces
The rise of antibiotic-resistant bacteria represents a major threat to global health, creating an
urgent need to discover new antibiotics. Natural products derived from the genus …
urgent need to discover new antibiotics. Natural products derived from the genus …
Multiplexed mobilization and expression of biosynthetic gene clusters
Bacterial genomes contain large reservoirs of biosynthetic gene clusters (BGCs) that are
predicted to encode unexplored natural products. Heterologous expression of previously …
predicted to encode unexplored natural products. Heterologous expression of previously …