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An overview of MetaMap: historical perspective and recent advances
AR Aronson, FM Lang - Journal of the American Medical …, 2010 - academic.oup.com
MetaMap is a widely available program providing access to the concepts in the unified
medical language system (UMLS) Metathesaurus from biomedical text. This study reports on …
medical language system (UMLS) Metathesaurus from biomedical text. This study reports on …
[HTML][HTML] Empirical distributional semantics: methods and biomedical applications
Over the past 15 years, a range of methods have been developed that are able to learn
human-like estimates of the semantic relatedness between terms from the way in which …
human-like estimates of the semantic relatedness between terms from the way in which …
Mayo clinical Text Analysis and Knowledge Extraction System (cTAKES): architecture, component evaluation and applications
We aim to build and evaluate an open-source natural language processing system for
information extraction from electronic medical record clinical free-text. We describe and …
information extraction from electronic medical record clinical free-text. We describe and …
Effective map** of biomedical text to the UMLS Metathesaurus: the MetaMap program
AR Aronson - Proceedings of the AMIA Symposium, 2001 - pmc.ncbi.nlm.nih.gov
The UMLS Metathesaurus, the largest thesaurus in the biomedical domain, provides a
representation of biomedical knowledge consisting of concepts classified by semantic type …
representation of biomedical knowledge consisting of concepts classified by semantic type …
[HTML][HTML] The interaction of domain knowledge and linguistic structure in natural language processing: interpreting hypernymic propositions in biomedical text
Interpretation of semantic propositions in free-text documents such as MEDLINE citations
would provide valuable support for biomedical applications, and several approaches to …
would provide valuable support for biomedical applications, and several approaches to …
Automated encoding of clinical documents based on natural language processing
Objective: The aim of this study was to develop a method based on natural language
processing (NLP) that automatically maps an entire clinical document to codes with …
processing (NLP) that automatically maps an entire clinical document to codes with …
[PDF][PDF] Topic indexing with Wikipedia
Wikipedia can be utilized as a controlled vocabulary for identifying the main topics in a
document, with article titles serving as index terms and redirect titles as their synonyms …
document, with article titles serving as index terms and redirect titles as their synonyms …
[HTML][HTML] Natural language processing to extract medical problems from electronic clinical documents: performance evaluation
In this study, we evaluate the performance of a Natural Language Processing (NLP)
application designed to extract medical problems from narrative text clinical documents. The …
application designed to extract medical problems from narrative text clinical documents. The …
The NLM indexing initiative's medical text indexer
AR Aronson, JG Mork, CW Gay, SM Humphrey… - MEDINFO …, 2004 - ebooks.iospress.nl
Abstract The Medical Text Indexer (MTI) is a program for producing McSH® indexing
recommendations. It is the major product of NLM's Indexing Initiative and has been used in …
recommendations. It is the major product of NLM's Indexing Initiative and has been used in …
Graph-based retriever captures the long tail of biomedical knowledge
Large language models (LLMs) are transforming the way information is retrieved with vast
amounts of knowledge being summarized and presented via natural language …
amounts of knowledge being summarized and presented via natural language …