Fluorescent proteins and genetically encoded biosensors

M Wang, Y Da, Y Tian - Chemical Society Reviews, 2023 - pubs.rsc.org
The genetically encoded fluorescent sensors convert chemical and physical signals into
light. They are powerful tools for the visualisation of physiological processes in living cells …

[HTML][HTML] Metal binding properties, stability and reactivity of zinc fingers

K Kluska, J Adamczyk, A Krężel - Coordination Chemistry Reviews, 2018 - Elsevier
Zinc fingers (ZFs) are among the most structurally diverse protein domains. They interact
with nucleic acids, other proteins and lipids to facilitate a multitude of biological processes …

APEX2‐based Proximity Labeling of Atox1 Identifies CRIP2 as a Nuclear Copper‐binding Protein that Regulates Autophagy Activation

L Chen, N Li, M Zhang, M Sun, J Bian… - Angewandte …, 2021 - Wiley Online Library
Mammalian cell nuclei contain copper, and cancer cells are known to accumulate aberrantly
high copper levels, yet the mechanisms underlying nuclear accumulation and copper's …

Fe-S clusters masquerading as zinc finger proteins

JD Pritts, SLJ Michel - Journal of Inorganic Biochemistry, 2022 - Elsevier
Metal ions are commonly found as protein co-factors in biology, and it is estimated that over
a quarter of all proteins require a metal cofactor. The distribution and utilization of metals in …

Zinc and copper ions differentially regulate prion-like phase separation dynamics of pan-virus nucleocapsid biomolecular condensates

A Monette, AJ Mouland - Viruses, 2020 - mdpi.com
Liquid-liquid phase separation (LLPS) is a rapidly growing research focus due to numerous
demonstrations that many cellular proteins phase-separate to form biomolecular …

Mycobacterium marinum MMAR_0267-regulated copper utilization facilitates bacterial escape from phagolysosome

J Xu, S Ma, Y Huang, Q Zhang, L Huang, H Xu… - Communications …, 2024 - nature.com
The host limits Mycobacterium tuberculosis (Mtb) by enriching copper in high
concentrations. This research investigates how Mtb escapes copper stress. The membrane …

Cu (I) disrupts the structure and function of the nonclassical zinc finger protein tristetraprolin (TTP)

GD Shimberg, K Ok, HM Neu, KE Splan… - Inorganic …, 2017 - ACS Publications
Tristetraprolin (TTP) is a nonclassical zinc finger (ZF) protein that plays a key role in
regulating inflammatory response. TTP regulates cytokines at the mRNA level by binding to …

[HTML][HTML] Comparison of force fields to study the zinc-finger containing protein NPL4, a target for disulfiram in cancer therapy

S Scrima, M Tiberti, U Ryde, M Lambrughi… - Biochimica et Biophysica …, 2023 - Elsevier
Molecular dynamics (MD) simulations are a powerful approach to studying the structure and
dynamics of proteins related to health and disease. Advances in the MD field allow modeling …

Targeting zinc finger proteins with exogenous metals and molecules: lessons learned from tristetraprolin, a CCCH type zinc finger

K Ok, MR Filipovic, SLJ Michel - European journal of inorganic …, 2021 - Wiley Online Library
ZF proteins are ubiquitous eukaryotic proteins that play important roles in gene regulation.
ZFs contain small domains made up of a combination of four cysteine and histidine residues …

Cadmium exchange with zinc in the non-classical zinc finger protein tristetraprolin

JEP Brandis, SM Zalesak, MA Kane… - Inorganic …, 2021 - ACS Publications
Tristetraprolin (TTP) is a nonclassical CCCH zinc finger protein that regulates inflammation.
TTP targets AU-rich RNA sequences of cytokine mRNAs forming a TTP/mRNA complex. This …