[HTML][HTML] Graph-based deep learning for medical diagnosis and analysis: past, present and future

D Ahmedt-Aristizabal, MA Armin, S Denman, C Fookes… - Sensors, 2021 - mdpi.com
With the advances of data-driven machine learning research, a wide variety of prediction
problems have been tackled. It has become critical to explore how machine learning and …

Revolutionizing digital pathology with the power of generative artificial intelligence and foundation models

A Waqas, MM Bui, EF Glassy, I El Naqa… - Laboratory …, 2023 - Elsevier
Digital pathology has transformed the traditional pathology practice of analyzing tissue
under a microscope into a computer vision workflow. Whole-slide imaging allows …

Pathomic fusion: an integrated framework for fusing histopathology and genomic features for cancer diagnosis and prognosis

RJ Chen, MY Lu, J Wang… - … on Medical Imaging, 2020 - ieeexplore.ieee.org
Cancer diagnosis, prognosis, mymargin and therapeutic response predictions are based on
morphological information from histology slides and molecular profiles from genomic data …

Whole slide images are 2d point clouds: Context-aware survival prediction using patch-based graph convolutional networks

RJ Chen, MY Lu, M Shaban, C Chen, TY Chen… - … Image Computing and …, 2021 - Springer
Cancer prognostication is a challenging task in computational pathology that requires
context-aware representations of histology features to adequately infer patient survival …

OCELOT: overlapped cell on tissue dataset for histopathology

J Ryu, AV Puche, JW Shin, S Park… - Proceedings of the …, 2023 - openaccess.thecvf.com
Cell detection is a fundamental task in computational pathology that can be used for
extracting high-level medical information from whole-slide images. For accurate cell …

A survey on graph-based deep learning for computational histopathology

D Ahmedt-Aristizabal, MA Armin, S Denman… - … Medical Imaging and …, 2022 - Elsevier
With the remarkable success of representation learning for prediction problems, we have
witnessed a rapid expansion of the use of machine learning and deep learning for the …

[HTML][HTML] Federated learning for computational pathology on gigapixel whole slide images

MY Lu, RJ Chen, D Kong, J Lipkova, R Singh… - Medical image …, 2022 - Elsevier
Deep Learning-based computational pathology algorithms have demonstrated profound
ability to excel in a wide array of tasks that range from characterization of well known …

Single-cell morphological and topological atlas reveals the ecosystem diversity of human breast cancer

S Zhao, DP Chen, T Fu, JC Yang, D Ma, XZ Zhu… - Nature …, 2023 - nature.com
Digital pathology allows computerized analysis of tumor ecosystem using whole slide
images (WSIs). Here, we present single-cell morphological and topological profiling (sc …

A survey on artificial intelligence in histopathology image analysis

MM Abdelsamea, U Zidan, Z Senousy… - … : Data Mining and …, 2022 - Wiley Online Library
The increasing adoption of the whole slide image (WSI) technology in histopathology has
dramatically transformed pathologists' workflow and allowed the use of computer systems in …