Doubling down on genomes: polyploidy and crop plants

S Renny‐Byfield, JF Wendel - American journal of botany, 2014 - Wiley Online Library
Polyploidy, or whole genome multiplication, is ubiquitous among angiosperms. Many crop
species are relatively recent allopolyploids, resulting from interspecific hybridization and …

Intragenomic rDNA variation-the product of concerted evolution, mutation, or something in between?

W Wang, X Zhang, S Garcia, AR Leitch, A Kovařík - Heredity, 2023 - nature.com
The classical model of concerted evolution states that hundreds to thousands of ribosomal
DNA (rDNA) units undergo homogenization, making the multiple copies of the individual …

Polyploidy: pitfalls and paths to a paradigm

DE Soltis, CJ Visger, DB Marchant… - American journal of …, 2016 - Wiley Online Library
Investigators have long searched for a polyploidy paradigm—rules or principles that might
be common following polyploidization (whole‐genome duplication, WGD). Here we attempt …

Subgenome dominance in an interspecific hybrid, synthetic allopolyploid, and a 140-year-old naturally established neo-allopolyploid monkeyflower

PP Edger, R Smith, MR McKain, AM Cooley… - The Plant …, 2017 - academic.oup.com
Recent studies have shown that one of the parental subgenomes in ancient polyploids is
generally more dominant, having retained more genes and being more highly expressed, a …

Homoeologous recombination in allopolyploids: the polyploid ratchet

RT Gaeta, J Chris Pires - New Phytologist, 2010 - Wiley Online Library
Polyploidization and recombination are two important processes driving evolution through
the building and resha** of genomes. Allopolyploids arise from hybridization and …

Homoeolog expression bias and expression level dominance in allopolyploids

CE Grover, JP Gallagher, EP Szadkowski, MJ Yoo… - New Phytologist, 2012 - JSTOR
Polyploidy is now recognized as a characteristic feature of all angiosperm genomes (Jiao et
al., 2011), and remains an important speciation process today (Wendel, 2000; Comai, 2005; …

The Ups and Downs of Genome Size Evolution in Polyploid Species of Nicotiana (Solanaceae)

IJ Leitch, L Hanson, KY Lim, A Kovarik… - Annals of …, 2008 - academic.oup.com
Background In studies looking at individual polyploid species, the most common patterns of
genomic change are that either genome size in the polyploid is additive (ie the sum of …

Breaking free: the genomics of allopolyploidy-facilitated niche expansion in white clover

AG Griffiths, R Moraga, M Tausen, V Gupta… - The Plant …, 2019 - academic.oup.com
The merging of distinct genomes, allopolyploidization, is a widespread phenomenon in
plants. It generates adaptive potential through increased genetic diversity, but examples …

Distribution of 45S rDNA sites in chromosomes of plants: structural and evolutionary implications

F Roa, M Guerra - BMC Evolutionary Biology, 2012 - Springer
Background 45S rDNA sites are the most widely documented chromosomal regions in
eukaryotes. The analysis of the distribution of these sites along the chromosome in several …

Ecological and genetic factors linked to contrasting genome dynamics in seed plants

AR Leitch, IJ Leitch - New Phytologist, 2012 - Wiley Online Library
The large‐scale replacement of gymnosperms by angiosperms in many ecological niches
over time and the huge disparity in species numbers have led scientists to explore factors …