A comprehensive survey of graph neural networks for knowledge graphs

Z Ye, YJ Kumar, GO Sing, F Song, J Wang - IEEE Access, 2022 - ieeexplore.ieee.org
The Knowledge graph, a multi-relational graph that represents rich factual information
among entities of diverse classifications, has gradually become one of the critical tools for …

Application of Artificial Intelligence in Drug–Drug Interactions Prediction: A Review

Y Zhang, Z Deng, X Xu, Y Feng… - Journal of chemical …, 2023 - ACS Publications
Drug–drug interactions (DDI) are a critical aspect of drug research that can have adverse
effects on patients and can lead to serious consequences. Predicting these events …

Attention-based knowledge graph representation learning for predicting drug-drug interactions

X Su, L Hu, Z You, P Hu, B Zhao - Briefings in bioinformatics, 2022 - academic.oup.com
Drug–drug interactions (DDIs) are known as the main cause of life-threatening adverse
events, and their identification is a key task in drug development. Existing computational …

Label propagation prediction of drug-drug interactions based on clinical side effects

P Zhang, F Wang, J Hu, R Sorrentino - Scientific reports, 2015 - nature.com
Drug-drug interaction (DDI) is an important topic for public health and thus attracts attention
from both academia and industry. Here we hypothesize that clinical side effects (SEs) …

SumGNN: multi-typed drug interaction prediction via efficient knowledge graph summarization

Y Yu, K Huang, C Zhang, LM Glass, J Sun… - …, 2021 - academic.oup.com
Motivation Thanks to the increasing availability of drug–drug interactions (DDI) datasets and
large biomedical knowledge graphs (KGs), accurate detection of adverse DDI using …

An ai‐based prediction model for drug‐drug interactions in osteoporosis and Paget's diseases from smiles

TNK Hung, NQK Le, NH Le, L Van Tuan… - Molecular …, 2022 - Wiley Online Library
The skeleton is one of the most important organs in the human body in assisting our motion
and activities; however, bone density attenuates gradually as we age. Among common bone …

Predicting potential drug-drug interactions by integrating chemical, biological, phenotypic and network data

W Zhang, Y Chen, F Liu, F Luo, G Tian, X Li - BMC bioinformatics, 2017 - Springer
Abstract Background Drug-drug interactions (DDIs) are one of the major concerns in drug
discovery. Accurate prediction of potential DDIs can help to reduce unexpected interactions …

Machine learning-based prediction of drug–drug interactions by integrating drug phenotypic, therapeutic, chemical, and genomic properties

F Cheng, Z Zhao - Journal of the American Medical Informatics …, 2014 - academic.oup.com
Abstract Objective Drug–drug interactions (DDIs) are an important consideration in both
drug development and clinical application, especially for co-administered medications …

Drug-drug interaction prediction based on knowledge graph embeddings and convolutional-LSTM network

MR Karim, M Cochez, JB Jares, M Uddin… - Proceedings of the 10th …, 2019 - dl.acm.org
Interference between pharmacological substances can cause serious medical injuries.
Correctly predicting so-called drug-drug interactions (DDI) does not only reduce these cases …

Emerging drug interaction prediction enabled by a flow-based graph neural network with biomedical network

Y Zhang, Q Yao, L Yue, X Wu, Z Zhang, Z Lin… - Nature Computational …, 2023 - nature.com
Drug–drug interactions (DDIs) for emerging drugs offer possibilities for treating and
alleviating diseases, and accurately predicting these with computational methods can …