Galectin-3: an open-ended story

J Dumic, S Dabelic, M Flögel - … et Biophysica Acta (BBA)-General Subjects, 2006 - Elsevier
Galectins, an ancient lectin family, are characterized by specific binding of β-galactosides
through evolutionary conserved sequence elements of carbohydrate-recognition domain …

Writers and readers of histone acetylation: structure, mechanism, and inhibition

R Marmorstein, MM Zhou - Cold Spring Harbor …, 2014 - cshperspectives.cshlp.org
Histone acetylation marks are written by histone acetyltransferases (HATs) and read by
bromodomains (BrDs), and less commonly by other protein modules. These proteins …

Cryptic inoviruses revealed as pervasive in bacteria and archaea across Earth's biomes

S Roux, M Krupovic, RA Daly, AL Borges… - Nature …, 2019 - nature.com
Bacteriophages from the Inoviridae family (inoviruses) are characterized by their unique
morphology, genome content and infection cycle. One of the most striking features of …

CD-Search: protein domain annotations on the fly

A Marchler-Bauer, SH Bryant - Nucleic acids research, 2004 - academic.oup.com
Abstract We describe the Conserved Domain Search service (CD-Search), a web-based tool
for the detection of structural and functional domains in protein sequences. CD-Search uses …

A high-quality chromosome-level genome assembly reveals genetics for important traits in eggplant

Q Wei, J Wang, W Wang, T Hu, H Hu… - Horticulture …, 2020 - academic.oup.com
Eggplant (Solanum melongena L.) is an economically important vegetable crop in the
Solanaceae family, with extensive diversity among landraces and close relatives. Here, we …

Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution

Project management: Fulton Lucinda A. 1 Mardis … - Nature, 2004 - nature.com
We present here a draft genome sequence of the red jungle fowl, Gallus gallus. Because the
chicken is a modern descendant of the dinosaurs and the first non-mammalian amniote to …

TRANSFAC® and its module TRANSCompel®: transcriptional gene regulation in eukaryotes

V Matys, OV Kel-Margoulis, E Fricke… - Nucleic acids …, 2006 - academic.oup.com
The TRANSFAC® database on transcription factors, their binding sites, nucleotide
distribution matrices and regulated genes as well as the complementing database …

Pfam: clans, web tools and services

RD Finn, J Mistry, B Schuster-Böckler… - Nucleic acids …, 2006 - academic.oup.com
Pfam is a database of protein families that currently contains 7973 entries (release 18.0). A
recent development in Pfam has enabled the grou** of related families into clans. Pfam …

Biological insights from structures of two-component proteins

R Gao, AM Stock - Annual review of microbiology, 2009 - annualreviews.org
Two-component signal transduction based on phosphotransfer from a histidine protein
kinase to a response regulator protein is a prevalent strategy for coupling environmental …

Genome-wide analysis of the MYB transcription factor superfamily in soybean

H Du, SS Yang, Z Liang, BR Feng, L Liu, YB Huang… - BMC plant biology, 2012 - Springer
Background The MYB superfamily constitutes one of the most abundant groups of
transcription factors described in plants. Nevertheless, their functions appear to be highly …