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[HTML][HTML] Current methods for recombination detection in bacteria
The role of genetic exchanges, ie, homologous recombination (HR) and horizontal gene
transfer (HGT), in bacteria cannot be overestimated for it is a pivotal mechanism leading to …
transfer (HGT), in bacteria cannot be overestimated for it is a pivotal mechanism leading to …
Probiotics and commensal bacteria metabolites trigger epigenetic changes in the gut and influence beneficial mood dispositions
The effect of the intestinal microbiome on the gut–brain axis has received considerable
attention, strengthening the evidence that intestinal bacteria influence emotions and …
attention, strengthening the evidence that intestinal bacteria influence emotions and …
Whole-genome sequences from wild-type and laboratory-evolved strains define the alleleome and establish its hallmarks
The genomic diversity across strains of a species forms the genetic basis for differences in
their behavior. A large-scale assessment of sequence variation has been made possible by …
their behavior. A large-scale assessment of sequence variation has been made possible by …
Comparative pangenomics: analysis of 12 microbial pathogen pangenomes reveals conserved global structures of genetic and functional diversity
Background With the exponential growth of publicly available genome sequences,
pangenome analyses have provided increasingly complete pictures of genetic diversity for …
pangenome analyses have provided increasingly complete pictures of genetic diversity for …
Gene flow and introgression are pervasive forces sha** the evolution of bacterial species
Background Although originally thought to evolve clonally, studies have revealed that most
bacteria exchange DNA. However, it remains unclear to what extent gene flow shapes the …
bacteria exchange DNA. However, it remains unclear to what extent gene flow shapes the …
Population genomics and morphological data bridge the centuries of cyanobacterial taxonomy along the continuum of Microcoleus species
The filamentous cyanobacterium Microcoleus is among the most important global primary
producers, especially in hot and cold desert ecosystems. This taxon represents a continuum …
producers, especially in hot and cold desert ecosystems. This taxon represents a continuum …
Microevolution, speciation and macroevolution in rhizobia: genomic mechanisms and selective patterns
NA Provorov, EE Andronov, AK Kimeklis… - Frontiers in Plant …, 2022 - frontiersin.org
Nodule bacteria (rhizobia), N2-fixing symbionts of leguminous plants, represent an excellent
model to study the fundamental issues of evolutionary biology, including the tradeoff …
model to study the fundamental issues of evolutionary biology, including the tradeoff …
In vivo, in vitro and in silico: an open space for the development of microbe‐based applications of synthetic biology
A Danchin - Microbial Biotechnology, 2022 - Wiley Online Library
Living systems are studied using three complementary approaches: living cells, cell‐free
systems and computer‐mediated modelling. Progresses in understanding, allowing …
systems and computer‐mediated modelling. Progresses in understanding, allowing …
New Insights on Metabolic Features of Bacillus subtilis Based on Multistrain Genome-Scale Metabolic Modeling
Bacillus subtilis is an effective workhorse for the production of many industrial products. The
high interest aroused by B. subtilis has guided a large metabolic modeling effort of this …
high interest aroused by B. subtilis has guided a large metabolic modeling effort of this …
Systems biology approach to functionally assess the Clostridioides difficile pangenome reveals genetic diversity with discriminatory power
Combatting Clostridioides difficile infections, a dominant cause of hospital-associated
infections with incidence and resulting deaths increasing worldwide, is complicated by the …
infections with incidence and resulting deaths increasing worldwide, is complicated by the …