Genomics review of holocellulose deconstruction by aspergilli

F Segato, ARL Damásio, RC de Lucas… - Microbiology and …, 2014 - Am Soc Microbiol
Biomass is constructed of dense recalcitrant polymeric materials: proteins, lignin, and
holocellulose, a fraction constituting fibrous cellulose wrapped in hemicellulose-pectin …

An update of DIVERGE software for functional divergence analysis of protein family

X Gu, Y Zou, Z Su, W Huang, Z Zhou… - Molecular biology …, 2013 - academic.oup.com
DIVERGE is a software system for phylogeny-based analyses of protein family evolution and
functional divergence. It provides a suite of statistical tools for selection and prioritization of …

Glucanases and chitinases

C Roncero, CR Vázquez de Aldana - The Fungal Cell Wall: An Armour …, 2020 - Springer
In many yeast and fungi, β-(1, 3)-glucan and chitin are essential components of the cell wall,
an important structure that surrounds cells and which is responsible for their mechanical …

Glycoside hydrolase processivity is directly related to oligosaccharide binding free energy

CM Payne, W Jiang, MR Shirts… - Journal of the …, 2013 - ACS Publications
Many glycoside hydrolase (GH) enzymes act via a processive mechanism whereby an
individual carbohydrate polymer chain is decrystallized and hydrolyzed along the chain …

Bioinformatic characterisation of genes encoding cell wall degrading enzymes in the Phytophthora parasitica genome

LM Blackman, DP Cullerne, AR Hardham - BMC genomics, 2014 - Springer
Background A critical aspect of plant infection by the majority of pathogens is penetration of
the plant cell wall. This process requires the production and secretion of a broad spectrum of …

Phylogenetic systematics of Butyrivibrio and Pseudobutyrivibrio genomes illustrate vast taxonomic diversity, open genomes and an abundance of carbohydrate …

SE Pidcock, T Skvortsov, FG Santos… - Microbial …, 2021 - microbiologyresearch.org
Butyrivibrio and Pseudobutyrivibrio dominate in anaerobic gastrointestinal microbiomes,
particularly the rumen, where they play a key role in harvesting dietary energy. Within these …

GNBP1 as a potential RNAi target to enhance the virulence of Beauveria bassiana for aphid control

C Ye, ZW Wang, YL Sheng, ZG Wang, G Smagghe… - Journal of Pest …, 2022 - Springer
Gram-negative binding proteins (GNBPs) are important in the innate immune system of
insects in recognition of fungi pathogen, such as Beauveria bassiana. However, this …

Systematic deletions in the cellobiohydrolase (CBH) Cel7A from the fungus Trichoderma reesei reveal flexible loops critical for CBH activity

C Schiano-di-Cola, N Røjel, K Jensen, J Kari… - Journal of Biological …, 2019 - ASBMB
Glycoside hydrolase family 7 (GH7) cellulases are some of the most efficient degraders of
cellulose, making them particularly relevant for industries seeking to produce renewable …

GH16 and GH81 family β‐(1,3)‐glucanases in Aspergillus fumigatus are essential for conidial cell wall morphogenesis

I Mouyna, V Aimanianda, L Hartl, M Prevost… - Cellular …, 2016 - Wiley Online Library
The fungal cell wall is a rigid structure because of fibrillar and branched β‐(1, 3)‐glucan
linked to chitin. Softening of the cell wall is an essential phenomenon during fungal …

Silencing gram-negative bacteria binding protein 1 decreases the immunity of Tribolium castaneum against bacteria

J Bi, P Liu, R Gao, Y Jiang, C Zhang, T Zhao… - International Journal of …, 2024 - Elsevier
Gram-negative bacteria binding proteins (GNBPs) have the ability to recognize molecular
patterns associated with microbial pathogens (PAMPs), leading to the activation of immune …