Nucleus segmentation: towards automated solutions

R Hollandi, N Moshkov, L Paavolainen, E Tasnadi… - Trends in Cell …, 2022‏ - cell.com
Single nucleus segmentation is a frequent challenge of microscopy image processing, since
it is the first step of many quantitative data analysis pipelines. The quality of tracking single …

Cat-seg: Cost aggregation for open-vocabulary semantic segmentation

S Cho, H Shin, S Hong, A Arnab… - Proceedings of the …, 2024‏ - openaccess.thecvf.com
Open-vocabulary semantic segmentation presents the challenge of labeling each pixel
within an image based on a wide range of text descriptions. In this work we introduce a …

Nuclei and glands instance segmentation in histology images: a narrative review

ES Nasir, A Parvaiz, MM Fraz - Artificial Intelligence Review, 2023‏ - Springer
Examination of tissue biopsy and quantification of the various characteristics of cellular
processes are clinical benchmarks in cancer diagnosis. Nuclei and glands instance …

Diversified and personalized multi-rater medical image segmentation

Y Wu, X Luo, Z Xu, X Guo, L Ju, Z Ge… - Proceedings of the …, 2024‏ - openaccess.thecvf.com
Annotation ambiguity due to inherent data uncertainties such as blurred boundaries in
medical scans and different observer expertise and preferences has become a major …

Cx22: A new publicly available dataset for deep learning-based segmentation of cervical cytology images

G Liu, Q Ding, H Luo, M Sha, X Li, M Ju - Computers in Biology and …, 2022‏ - Elsevier
The segmentation of cervical cytology images plays an important role in the automatic
analysis of cervical cytology screening. Although deep learning-based segmentation …

DenseRes-Unet: Segmentation of overlapped/clustered nuclei from multi organ histopathology images

I Kiran, B Raza, A Ijaz, MA Khan - Computers in Biology and Medicine, 2022‏ - Elsevier
Cancer is the second deadliest disease globally that can affect any human body organ.
Early detection of cancer can increase the chances of survival in humans. Morphometric …

Nuinsseg: a fully annotated dataset for nuclei instance segmentation in h&e-stained histological images

A Mahbod, C Polak, K Feldmann, R Khan, K Gelles… - Scientific Data, 2024‏ - nature.com
In computational pathology, automatic nuclei instance segmentation plays an essential role
in whole slide image analysis. While many computerized approaches have been proposed …

What a mess: Multi-domain evaluation of zero-shot semantic segmentation

B Blumenstiel, J Jakubik, H Kühne… - Advances in Neural …, 2023‏ - proceedings.neurips.cc
While semantic segmentation has seen tremendous improvements in the past, there are still
significant labeling efforts necessary and the problem of limited generalization to classes …

DAN-NucNet: A dual attention based framework for nuclei segmentation in cancer histology images under wild clinical conditions

I Ahmad, Y **a, H Cui, ZU Islam - Expert Systems with Applications, 2023‏ - Elsevier
Nuclei segmentation plays an essential role in histology analysis. The nuclei segmentation
in histology images is challenging in variable conditions (clinical wild), such as poor staining …

A foundation model for cell segmentation

U Israel, M Marks, R Dilip, Q Li, C Yu, E Laubscher… - …, 2024‏ - pmc.ncbi.nlm.nih.gov
Cells are a fundamental unit of biological organization, and identifying them in imaging data–
cell segmentation–is a critical task for various cellular imaging experiments. While deep …