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Gasdermins and pyroptosis in the kidney
EE Elias, B Lyons, DA Muruve - Nature Reviews Nephrology, 2023 - nature.com
Pyroptosis is a form of regulated cell death that is mediated by the membrane-targeting, pore-
forming gasdermin family of proteins. Pyroptosis was initially described as a caspase 1-and …
forming gasdermin family of proteins. Pyroptosis was initially described as a caspase 1-and …
Applications of single-cell sequencing in cancer research: progress and perspectives
Y Lei, R Tang, J Xu, W Wang, B Zhang, J Liu… - Journal of hematology & …, 2021 - Springer
Single-cell sequencing, including genomics, transcriptomics, epigenomics, proteomics and
metabolomics sequencing, is a powerful tool to decipher the cellular and molecular …
metabolomics sequencing, is a powerful tool to decipher the cellular and molecular …
CellMarker 2.0: an updated database of manually curated cell markers in human/mouse and web tools based on scRNA-seq data
C Hu, T Li, Y Xu, X Zhang, F Li, J Bai… - Nucleic acids …, 2023 - academic.oup.com
Abstract CellMarker 2.0 (http://bio-bigdata. hrbmu. edu. cn/CellMarker or http://117.50.
127.228/CellMarker/) is an updated database that provides a manually curated collection of …
127.228/CellMarker/) is an updated database that provides a manually curated collection of …
Deciphering cell–cell interactions and communication from gene expression
Cell–cell interactions orchestrate organismal development, homeostasis and single-cell
functions. When cells do not properly interact or improperly decode molecular messages …
functions. When cells do not properly interact or improperly decode molecular messages …
Single-nucleus cross-tissue molecular reference maps toward understanding disease gene function
Understanding gene function and regulation in homeostasis and disease requires
knowledge of the cellular and tissue contexts in which genes are expressed. Here, we …
knowledge of the cellular and tissue contexts in which genes are expressed. Here, we …
Inhibition of ACSS2-mediated histone crotonylation alleviates kidney fibrosis via IL-1β-dependent macrophage activation and tubular cell senescence
L Li, T **ang, J Guo, F Guo, Y Wu, H Feng, J Liu… - Nature …, 2024 - nature.com
Histone lysine crotonylation (Kcr), as a posttranslational modification, is widespread as
acetylation (Kac); however, its roles are largely unknown in kidney fibrosis. In this study, we …
acetylation (Kac); however, its roles are largely unknown in kidney fibrosis. In this study, we …
Organoid-on-a-chip model of human ARPKD reveals mechanosensing pathomechanisms for drug discovery
K Hiratsuka, T Miyoshi, KT Kroll, NR Gupta… - Science …, 2022 - science.org
Organoids serve as a novel tool for disease modeling in three-dimensional multicellular
contexts. Static organoids, however, lack the requisite biophysical microenvironment such …
contexts. Static organoids, however, lack the requisite biophysical microenvironment such …
Mineralocorticoid receptor antagonists in diabetic kidney disease—Mechanistic and therapeutic effects
Chronic kidney disease (CKD) is the leading complication in type 2 diabetes (T2D) and
current therapies that limit CKD progression and the development of cardiovascular disease …
current therapies that limit CKD progression and the development of cardiovascular disease …
Cell profiling of mouse acute kidney injury reveals conserved cellular responses to injury
After acute kidney injury (AKI), patients either recover or alternatively develop fibrosis and
chronic kidney disease. Interactions between injured epithelia, stroma, and inflammatory …
chronic kidney disease. Interactions between injured epithelia, stroma, and inflammatory …
Systematic assessment of tissue dissociation and storage biases in single-cell and single-nucleus RNA-seq workflows
Background Single-cell RNA sequencing has been widely adopted to estimate the cellular
composition of heterogeneous tissues and obtain transcriptional profiles of individual cells …
composition of heterogeneous tissues and obtain transcriptional profiles of individual cells …