Classification, ontology, and precision medicine

MA Haendel, CG Chute… - New England Journal of …, 2018 - Mass Medical Soc
Ontologies, Phenotypes, and Big Data Data-organizing methods have been in place for
centuries, but very large data sets have come into being relatively recently. The authors …

The RASopathies: from pathogenetics to therapeutics

KE Hebron, ER Hernandez… - Disease models & …, 2022 - journals.biologists.com
The RASopathies are a group of disorders caused by a germline mutation in one of the
genes encoding a component of the RAS/MAPK pathway. These disorders, including …

The International Mouse Phenoty** Consortium: comprehensive knockout phenoty** underpinning the study of human disease

T Groza, FL Gomez, HH Mashhadi… - Nucleic acids …, 2023 - academic.oup.com
Abstract The International Mouse Phenoty** Consortium (IMPC; https://www.
mousephenotype. org/) web portal makes available curated, integrated and analysed …

The single-cell transcriptional landscape of mammalian organogenesis

J Cao, M Spielmann, X Qiu, X Huang, DM Ibrahim… - Nature, 2019 - nature.com
Mammalian organogenesis is a remarkable process. Within a short timeframe, the cells of
the three germ layers transform into an embryo that includes most of the major internal and …

Expansion of the Human Phenotype Ontology (HPO) knowledge base and resources

S Köhler, L Carmody, N Vasilevsky… - Nucleic acids …, 2019 - academic.oup.com
Abstract The Human Phenotype Ontology (HPO)—a standardized vocabulary of phenotypic
abnormalities associated with 7000+ diseases—is used by thousands of researchers …

Spatiotemporal transcriptomic maps of whole mouse embryos at the onset of organogenesis

A Sampath Kumar, L Tian, A Bolondi, AA Hernández… - Nature Genetics, 2023 - nature.com
Spatiotemporal orchestration of gene expression is required for proper embryonic
development. The use of single-cell technologies has begun to provide improved resolution …

[HTML][HTML] Translation of non-canonical open reading frames as a cancer cell survival mechanism in childhood medulloblastoma

DA Hofman, J Ruiz-Orera, I Yannuzzi, R Murugesan… - Molecular Cell, 2024 - cell.com
A hallmark of high-risk childhood medulloblastoma is the dysregulation of RNA translation.
Currently, it is unknown whether medulloblastoma dysregulates the translation of putatively …

[HTML][HTML] Animal models to study bile acid metabolism

J Li, PA Dawson - Biochimica et Biophysica Acta (BBA)-Molecular Basis …, 2019 - Elsevier
The use of animal models, particularly genetically modified mice, continues to play a critical
role in studying the relationship between bile acid metabolism and human liver disease …

Chromatin interaction analyses elucidate the roles of PRC2-bound silencers in mouse development

CY Ngan, CH Wong, H Tjong, W Wang, RL Goldfeder… - Nature …, 2020 - nature.com
Lineage-specific gene expression is modulated by a balance between transcriptional
activation and repression during animal development. Knowledge about enhancer-centered …

[HTML][HTML] The molecular basis of MeCP2 function in the brain

R Tillotson, A Bird - Journal of molecular biology, 2020 - Elsevier
MeCP2 is a reader of the DNA methylome that occupies a large proportion of the genome
due to its high abundance and the frequency of its target sites. It has been the subject of …