Glycoproteomics

I Bagdonaite, SA Malaker, DA Polasky… - Nature Reviews …, 2022 - nature.com
Protein glycosylation involves the co-translational or post-translational addition of glycans to
proteins and is a crucial protein modification in health and disease. The aim of …

Mass spectrometry approaches to glycomic and glycoproteomic analyses

LR Ruhaak, G Xu, Q Li, E Goonatilleke… - Chemical …, 2018 - ACS Publications
Glycomic and glycoproteomic analyses involve the characterization of oligosaccharides
(glycans) conjugated to proteins. Glycans are produced through a complicated nontemplate …

Optimal Dissociation Methods Differ for N- and O-Glycopeptides

NM Riley, SA Malaker, MD Driessen… - Journal of proteome …, 2020 - ACS Publications
Site-specific characterization of glycosylation requires intact glycopeptide analysis, and
recent efforts have focused on how to best interrogate glycopeptides using tandem mass …

Glyco-Decipher enables glycan database-independent peptide matching and in-depth characterization of site-specific N-glycosylation

Z Fang, H Qin, J Mao, Z Wang, N Zhang… - Nature …, 2022 - nature.com
Glycopeptides with unusual glycans or poor peptide backbone fragmentation in tandem
mass spectrometry are unaccounted for in typical site-specific glycoproteomics analysis and …

Chemical glycoproteomics

KK Palaniappan, CR Bertozzi - Chemical reviews, 2016 - ACS Publications
Chemical tools have accelerated progress in glycoscience, reducing experimental barriers
to studying protein glycosylation, the most widespread and complex form of posttranslational …

MS‐based glycomics and glycoproteomics methods enabling isomeric characterization

W Peng, CD Gutierrez Reyes, S Gautam… - Mass spectrometry …, 2023 - Wiley Online Library
Glycosylation is one of the most significant and abundant posttranslational modifications in
mammalian cells. It mediates a wide range of biofunctions, including cell adhesion, cell …

Recent advances in software tools for more generic and precise intact glycopeptide analysis

W Cao, M Liu, S Kong, M Wu, Y Zhang… - Molecular & Cellular …, 2021 - ASBMB
Intact glycopeptide identification has long been known as a key and challenging barrier to
the comprehensive and accurate understanding the role of glycosylation in an organism …

The benefits of hybrid fragmentation methods for glycoproteomics

KR Reiding, A Bondt, V Franc, AJR Heck - TrAC Trends in Analytical …, 2018 - Elsevier
Glycosylation is an important and variable protein modification that can have a profound
effect on the physiological characteristics of the substrate, warranting careful examination in …

Advances in mass spectrometry‐based glycoproteomics

A Yu, J Zhao, W Peng, A Banazadeh… - …, 2018 - Wiley Online Library
Protein glycosylation, an important PTM, plays an essential role in a wide range of biological
processes such as immune response, intercellular signaling, inflammation, and host …

Toward Automated N-Glycopeptide Identification in Glycoproteomics

LY Lee, ESX Moh, BL Parker, M Bern… - Journal of proteome …, 2016 - ACS Publications
Advances in software-driven glycopeptide identification have facilitated N-glycoproteomics
studies reporting thousands of intact N-glycopeptides, ie, N-glycan-conjugated peptides, but …