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Nutrient sensing and TOR signaling in yeast and mammals
A González, MN Hall - The EMBO journal, 2017 - embopress.org
Coordinating cell growth with nutrient availability is critical for cell survival. The evolutionarily
conserved TOR (target of rapamycin) controls cell growth in response to nutrients, in …
conserved TOR (target of rapamycin) controls cell growth in response to nutrients, in …
The N‐end rule pathway and regulation by proteolysis
A Varshavsky - Protein science, 2011 - Wiley Online Library
The N‐end rule relates the regulation of the in vivo half‐life of a protein to the identity of its N‐
terminal residue. Degradation signals (degrons) that are targeted by the N‐end rule pathway …
terminal residue. Degradation signals (degrons) that are targeted by the N‐end rule pathway …
As extracellular glutamine levels decline, asparagine becomes an essential amino acid
When mammalian cells are deprived of glutamine, exogenous asparagine rescues cell
survival and growth. Here we report that this rescue results from use of asparagine in protein …
survival and growth. Here we report that this rescue results from use of asparagine in protein …
Regulation of Amino Acid, Nucleotide, and Phosphate Metabolism in Saccharomyces cerevisiae
PO Ljungdahl, B Daignan-Fornier - Genetics, 2012 - academic.oup.com
Ever since the beginning of biochemical analysis, yeast has been a pioneering model for
studying the regulation of eukaryotic metabolism. During the last three decades, the …
studying the regulation of eukaryotic metabolism. During the last three decades, the …
Gene regulatory network reconstruction using single-cell RNA sequencing of barcoded genotypes in diverse environments
Understanding how gene expression programs are controlled requires identifying regulatory
relationships between transcription factors and target genes. Gene regulatory networks are …
relationships between transcription factors and target genes. Gene regulatory networks are …
Metabolic heterogeneity and cross-feeding within isogenic yeast populations captured by DILAC
Genetically identical cells are known to differ in many physiological parameters such as
growth rate and drug tolerance. Metabolic specialization is believed to be a cause of such …
growth rate and drug tolerance. Metabolic specialization is believed to be a cause of such …
Multidimensional characterization of inducible promoters and a highly light-sensitive LOV-transcription factor
The ability to independently control the expression of different genes is important for
quantitative biology. Using budding yeast, we characterize GAL1pr, GALL, MET3pr, CUP1pr …
quantitative biology. Using budding yeast, we characterize GAL1pr, GALL, MET3pr, CUP1pr …
Functional metabolomics describes the yeast biosynthetic regulome
Genome-metabolism interactions enable cell growth. To probe the extent of these
interactions and delineate their functional contributions, we quantified the Saccharomyces …
interactions and delineate their functional contributions, we quantified the Saccharomyces …
Nitrogen source activates TOR (target of rapamycin) complex 1 via glutamine and independently of Gtr/Rag proteins
The evolutionary conserved TOR complex 1 (TORC1) activates cell growth in response to
nutrients. In yeast, TORC1 responds to the nitrogen source via a poorly understood …
nutrients. In yeast, TORC1 responds to the nitrogen source via a poorly understood …
Regulation of amino acid transport in Saccharomyces cerevisiae
F Bianchi, JS van't Klooster, SJ Ruiz… - … and Molecular Biology …, 2019 - Am Soc Microbiol
We review the mechanisms responsible for amino acid homeostasis in Saccharomyces
cerevisiae and other fungi. Amino acid homeostasis is essential for cell growth and survival …
cerevisiae and other fungi. Amino acid homeostasis is essential for cell growth and survival …