Gut microbiota metagenomics in aquaculture: factors influencing gut microbiome and its physiological role in fish
Fish gut microbiome confers various effects to the host fish; this includes overall size,
metabolism, feeding behaviour and immune response in the fish. The emergence of …
metabolism, feeding behaviour and immune response in the fish. The emergence of …
Analysing microbial community composition through amplicon sequencing: from sampling to hypothesis testing
Microbial ecology as a scientific field is fundamentally driven by technological advance. The
past decade's revolution in DNA sequencing cost and throughput has made it possible for …
past decade's revolution in DNA sequencing cost and throughput has made it possible for …
The global-scale distributions of soil protists and their contributions to belowground systems
Protists are ubiquitous in soil, where they are key contributors to nutrient cycling and energy
transfer. However, protists have received far less attention than other components of the soil …
transfer. However, protists have received far less attention than other components of the soil …
The nasal and gut microbiome in Parkinson's disease and idiopathic rapid eye movement sleep behavior disorder
A Heintz‐Buschart, U Pandey, T Wicke… - Movement …, 2018 - Wiley Online Library
Background Increasing evidence connects the gut microbiota and the onset and/or
phenotype of Parkinson's disease (PD). Differences in the abundances of specific bacterial …
phenotype of Parkinson's disease (PD). Differences in the abundances of specific bacterial …
The road to metagenomics: from microbiology to DNA sequencing technologies and bioinformatics
The study of microorganisms that pervade each and every part of this planet has
encountered many challenges through time such as the discovery of unknown organisms …
encountered many challenges through time such as the discovery of unknown organisms …
A microfluidics-based in vitro model of the gastrointestinal human–microbe interface
Abstract Changes in the human gastrointestinal microbiome are associated with several
diseases. To infer causality, experiments in representative models are essential, but widely …
diseases. To infer causality, experiments in representative models are essential, but widely …
Microbial community composition and diversity via 16S rRNA gene amplicons: evaluating the illumina platform
As new sequencing technologies become cheaper and older ones disappear, laboratories
switch vendors and platforms. Validating the new setups is a crucial part of conducting …
switch vendors and platforms. Validating the new setups is a crucial part of conducting …
Colonization and succession within the human gut microbiome by archaea, bacteria, and microeukaryotes during the first year of life
L Wampach, A Heintz-Buschart, A Hogan… - Frontiers in …, 2017 - frontiersin.org
Perturbations to the colonization process of the human gastrointestinal tract have been
suggested to result in adverse health effects later in life. Although much research has been …
suggested to result in adverse health effects later in life. Although much research has been …
Design and evaluation of Illumina MiSeq-compatible, 18S rRNA gene-specific primers for improved characterization of mixed phototrophic communities
The use of high-throughput sequencing technologies with the 16S rRNA gene for
characterization of bacterial and archaeal communities has become routine. However, the …
characterization of bacterial and archaeal communities has become routine. However, the …
pr2‐primers: An 18S rRNA primer database for protists
Metabarcoding of microbial eukaryotes (collectively known as protists) has developed
tremendously in the last decade, almost solely relying on the 18S rRNA gene. As microbial …
tremendously in the last decade, almost solely relying on the 18S rRNA gene. As microbial …