[HTML][HTML] Challenges in neoantigen-directed therapeutics

L Lybaert, S Lefever, B Fant, E Smits, B De Geest… - Cancer Cell, 2023 - cell.com
A fundamental prerequisite for the efficacy of cancer immunotherapy is the presence of
functional, antigen-specific T cells within the tumor. Neoantigen-directed therapy is a …

Challenges in develo** personalized neoantigen cancer vaccines

PD Katsikis, KJ Ishii, C Schliehe - Nature Reviews Immunology, 2024 - nature.com
The recent success of cancer immunotherapies has highlighted the benefit of harnessing the
immune system for cancer treatment. Vaccines have a long history of promoting immunity to …

A phenotypic signature that identifies neoantigen-reactive T cells in fresh human lung cancers

K Hanada, C Zhao, R Gil-Hoyos, JJ Gartner… - Cancer Cell, 2022 - cell.com
A common theme across multiple successful immunotherapies for cancer is the recognition
of tumor-specific mutations (neoantigens) by T cells. The rapid discovery of such antigen …

The immunopeptidome landscape associated with T cell infiltration, inflammation and immune editing in lung cancer

AI Kraemer, C Chong, F Huber, HS Pak, BJ Stevenson… - Nature cancer, 2023 - nature.com
One key barrier to improving efficacy of personalized cancer immunotherapies that are
dependent on the tumor antigenic landscape remains patient stratification. Although patients …

[HTML][HTML] Machine learning methods and harmonized datasets improve immunogenic neoantigen prediction

M Müller, F Huber, M Arnaud, AI Kraemer, ER Altimiras… - Immunity, 2023 - cell.com
The accurate selection of neoantigens that bind to class I human leukocyte antigen (HLA)
and are recognized by autologous T cells is a crucial step in many cancer immunotherapy …

A comprehensive proteogenomic pipeline for neoantigen discovery to advance personalized cancer immunotherapy

F Huber, M Arnaud, BJ Stevenson, J Michaux… - Nature …, 2024 - nature.com
The accurate identification and prioritization of antigenic peptides is crucial for the
development of personalized cancer immunotherapies. Publicly available pipelines to …

Genetic immune escape landscape in primary and metastatic cancer

F Martínez-Jiménez, P Priestley, C Shale, J Baber… - Nature Genetics, 2023 - nature.com
Studies have characterized the immune escape landscape across primary tumors. However,
whether late-stage metastatic tumors present differences in genetic immune escape (GIE) …

epiTCR: a highly sensitive predictor for TCR–peptide binding

MDN Pham, TN Nguyen, LS Tran, QTB Nguyen… - …, 2023 - academic.oup.com
Motivation Predicting the binding between T-cell receptor (TCR) and peptide presented by
human leucocyte antigen molecule is a highly challenging task and a key bottleneck in the …

Leveraging artificial intelligence in vaccine development: A narrative review

DB Olawade, J Teke, O Fapohunda… - Journal of …, 2024 - Elsevier
Vaccine development stands as a cornerstone of public health efforts, pivotal in curbing
infectious diseases and reducing global morbidity and mortality. However, traditional …

[HTML][HTML] Therapeutic cancer vaccines revam**: technology advancements and pitfalls

G Antonarelli, C Corti, P Tarantino, L Ascione… - Annals of …, 2021 - Elsevier
Highlights•CVs have been characterized by positive safety and immunogenicity profiles but
low levels of clinical efficacy.•Novel CV strategies entail personalized formulations and …