Using graph theory to analyze biological networks
Understanding complex systems often requires a bottom-up analysis towards a systems
biology approach. The need to investigate a system, not only as individual components but …
biology approach. The need to investigate a system, not only as individual components but …
Recent developments of the chemistry development kit (CDK)-an open-source java library for chemo-and bioinformatics
The Chemistry Development Kit (CDK) provides methods for common tasks in molecular
informatics, including 2D and 3D rendering of chemical structures, I/O routines, SMILES …
informatics, including 2D and 3D rendering of chemical structures, I/O routines, SMILES …
A universal system for digitization and automatic execution of the chemical synthesis literature
Robotic systems for chemical synthesis are growing in popularity but can be difficult to run
and maintain because of the lack of a standard operating system or capacity for direct …
and maintain because of the lack of a standard operating system or capacity for direct …
Open Babel: An open chemical toolbox
NM O'Boyle, M Banck, CA James, C Morley… - Journal of …, 2011 - Springer
Background A frequent problem in computational modeling is the interconversion of
chemical structures between different formats. While standard interchange formats exist (for …
chemical structures between different formats. While standard interchange formats exist (for …
The Chemistry Development Kit (CDK): An open-source Java library for chemo-and bioinformatics
The Chemistry Development Kit (CDK) is a freely available open-source Java library for
Structural Chemo-and Bioinformatics. Its architecture and capabilities as well as the …
Structural Chemo-and Bioinformatics. Its architecture and capabilities as well as the …
Community Resource for Innovation in Polymer Technology (CRIPT): A Scalable Polymer Material Data Structure
Community Resource for Innovation in Polymer Technology (CRIPT): A Scalable Polymer
Material Data Structure | ACS Central Science ACS ACS Publications C&EN CAS Find my …
Material Data Structure | ACS Central Science ACS ACS Publications C&EN CAS Find my …
[CITAS][C] An Introduction to Chemoinformatics
AR Leach - 2007 - books.google.com
Chemoinformatics draws upon techniques from many disciplines including computer
science, mathematics, computational chemistry and data visualisation to tackle these …
science, mathematics, computational chemistry and data visualisation to tackle these …
Extraction of chemical structures and reactions from the literature
DM Lowe - 2012 - repository.cam.ac.uk
The ever increasing quantity of chemical literature necessitates the creation of automated
techniques for extracting relevant information. This work focuses on two aspects: the …
techniques for extracting relevant information. This work focuses on two aspects: the …
The materials science procedural text corpus: Annotating materials synthesis procedures with shallow semantic structures
Materials science literature contains millions of materials synthesis procedures described in
unstructured natural language text. Large-scale analysis of these synthesis procedures …
unstructured natural language text. Large-scale analysis of these synthesis procedures …
OSCAR4: a flexible architecture for chemical text-mining
DM Jessop, SE Adams, EL Willighagen… - Journal of …, 2011 - Springer
Abstract The Open-Source Chemistry Analysis Routines (OSCAR) software, a toolkit for the
recognition of named entities and data in chemistry publications, has been developed since …
recognition of named entities and data in chemistry publications, has been developed since …