Bright building blocks for chemical biology

LD Lavis, RT Raines - ACS chemical biology, 2014 - ACS Publications
Small-molecule fluorophores manifest the ability of chemistry to solve problems in biology.
As we noted in a previous review (Lavis, LD; Raines, RT ACS Chem. Biol. 2008, 3, 142 …

Visualizing and manipulating biological processes by using HaloTag and SNAP‐tag technologies

CA Hoelzel, X Zhang - ChemBioChem, 2020 - Wiley Online Library
Visualizing and manipulating the behavior of proteins is crucial to understanding the
physiology of the cell. Methods of biorthogonal protein labeling are important tools to attain …

Kinetic and structural characterization of the self-labeling protein tags HaloTag7, SNAP-tag, and CLIP-tag

J Wilhelm, S Kühn, M Tarnawski, G Gotthard… - Biochemistry, 2021 - ACS Publications
The self-labeling protein tags (SLPs) HaloTag7, SNAP-tag, and CLIP-tag allow the covalent
labeling of fusion proteins with synthetic molecules for applications in bioimaging and …

Genetically encoded fluorescent tags

K Thorn - Molecular biology of the cell, 2017 - molbiolcell.org
Genetically encoded fluorescent tags are protein sequences that can be fused to a protein of
interest to render it fluorescent. These tags have revolutionized cell biology by allowing …

Design of a palette of SNAP-tag mimics of fluorescent proteins and their use as cell reporters

D Zhang, Z Chen, Z Du, B Bao, N Su, X Chen, Y Ge… - Cell Discovery, 2023 - nature.com
Naturally occurring fluorescent proteins (FPs) are the most widely used tools for tracking
cellular proteins and sensing cellular events. Here, we chemically evolved the self-labeling …

Directed enzyme evolution: beyond the low-hanging fruit

M Goldsmith, DS Tawfik - Current opinion in structural biology, 2012 - Elsevier
The field of directed evolution has progressed to the point where it is feasible to engineer
enzymes for unnatural substrates and reactions with catalytic efficiencies and regio …

Detecting molecular interactions in live-cell single-molecule imaging with proximity-assisted photoactivation (PAPA)

TGW Graham, JJ Ferrie, GM Dailey, R Tjian, X Darzacq - Elife, 2022 - elifesciences.org
Single-molecule imaging provides a powerful way to study biochemical processes in live
cells, yet it remains challenging to track single molecules while simultaneously detecting …

Advancing protein therapeutics through proximity-induced chemistry

L Cheng, Y Wang, Y Guo, SS Zhang, H **ao - Cell Chemical Biology, 2024 - cell.com
Recent years have seen a remarkable growth in the field of protein-based medical
treatments. Nevertheless, concerns have arisen regarding the cytotoxicity limitations, low …

HOPS-Dependent Endosomal Escape Demands Protein Unfolding

M Zoltek, AL Vázquez Maldonado, X Zhang… - ACS Central …, 2024 - ACS Publications
The inefficient translocation of proteins across biological membranes limits their application
as potential therapeutics and research tools. In many cases, the translocation of a protein …

Semisynthetic fluorescent pH sensors for imaging exocytosis and endocytosis

M Martineau, A Somasundaram, JB Grimm… - Nature …, 2017 - nature.com
The GFP-based superecliptic pHluorin (SEP) enables detection of exocytosis and
endocytosis, but its performance has not been duplicated in red fluorescent protein …