The cell tracking challenge: 10 years of objective benchmarking

M Maška, V Ulman, P Delgado-Rodriguez… - Nature …, 2023 - nature.com
Abstract The Cell Tracking Challenge is an ongoing benchmarking initiative that has
become a reference in cell segmentation and tracking algorithm development. Here, we …

Human monkeypox classification from skin lesion images with deep pre-trained network using mobile application

VH Sahin, I Oztel, G Yolcu Oztel - Journal of Medical Systems, 2022 - Springer
Recently, human monkeypox outbreaks have been reported in many countries. According to
the reports and studies, quick determination and isolation of infected people are essential to …

Label-free live cell recognition and tracking for biological discoveries and translational applications

B Chen, Z Yin, BWL Ng, DM Wang, RS Tuan, R Bise… - npj Imaging, 2024 - nature.com
Label-free, live cell recognition (ie instance segmentation) and tracking using computer
vision-aided recognition can be a powerful tool that rapidly generates multi-modal readouts …

Nisnet3d: Three-dimensional nuclear synthesis and instance segmentation for fluorescence microscopy images

L Wu, A Chen, P Salama, S Winfree, KW Dunn… - Scientific Reports, 2023 - nature.com
The primary step in tissue cytometry is the automated distinction of individual cells
(segmentation). Since cell borders are seldom labeled, cells are generally segmented by …

The Growing Strawberries Dataset: Tracking Multiple Objects with Biological Development over an Extended Period

J Wen, CR Verschoor, C Feng… - Proceedings of the …, 2024 - openaccess.thecvf.com
Abstract Multiple Object Tracking (MOT) is a rapidly develo** research field that targets
precise and reliable tracking of objects. Unfortunately, most available MOT datasets typically …

Ensemble deep learning object detection fusion for cell tracking, mitosis, and lineage

IE Toubal, N Al-Shakarji… - IEEE Open Journal …, 2023 - ieeexplore.ieee.org
Cell tracking and motility analysis are essential for understanding multicellular processes,
automated quantification in biomedical experiments, and medical diagnosis and treatment …

A compound loss function with shape aware weight map for microscopy cell segmentation

Y Zhu, X Yin, E Meijering - IEEE Transactions on Medical …, 2022 - ieeexplore.ieee.org
Microscopy cell segmentation is a crucial step in biological image analysis and a
challenging task. In recent years, deep learning has been widely used to tackle this task …

PARADISE: Personalized and regional adaptation for HIE disease identification and segmentation

R Bao, RJ Weiss, SV Bates, Y Song, S He, J Li… - Medical Image …, 2025 - Elsevier
Hypoxic ischemic encephalopathy (HIE) is a brain injury occurring in approximately 1-
5/1000 term-born neonates. Accurate segmentation of HIE lesions in brain MRI is crucial for …

Lightweight SDE-Net Fusing Model-Based and Learned Features for Computational Histopathology

R Bao, Y Zhao, A Srivastava, S Frazier… - IEEE Journal of …, 2024 - ieeexplore.ieee.org
Model-based deep learning has the potential to significantly reduce the size of deep
architectures while matching the competitive performance of much deeper and wider …

MaxSigNet: Light learnable layer for semantic cell segmentation

R Yazdi, H Khotanlou - Biomedical Signal Processing and Control, 2024 - Elsevier
Semantic segmentation of cells is the entry point to other areas of cell analysis such as
instance segmentation, cell detection, Mitosis detection, and cell tracking. This paper …