Interactions between bacteria and bile salts in the gastrointestinal and hepatobiliary tracts

V Urdaneta, J Casadesús - Frontiers in medicine, 2017 - frontiersin.org
Bile salts and bacteria have intricate relationships. The composition of the intestinal pool of
bile salts is shaped by bacterial metabolism. In turn, bile salts play a role in intestinal …

Salmonella enterica: Survival, Colonization, and Virulence Differences among Serovars

A Andino, I Hanning - The Scientific World Journal, 2015 - Wiley Online Library
Data indicate that prevalence of specific serovars of Salmonella enterica in human
foodborne illness is not correlated with their prevalence in feed. Given that feed is a …

Unicycler: resolving bacterial genome assemblies from short and long sequencing reads

RR Wick, LM Judd, CL Gorrie… - PLoS computational …, 2017 - journals.plos.org
The Illumina DNA sequencing platform generates accurate but short reads, which can be
used to produce accurate but fragmented genome assemblies. Pacific Biosciences and …

Depletion of butyrate-producing Clostridia from the gut microbiota drives an aerobic luminal expansion of Salmonella

F Rivera-Chávez, LF Zhang, F Faber, CA Lopez… - Cell host & …, 2016 - cell.com
The mammalian intestine is host to a microbial community that prevents pathogen
expansion through unknown mechanisms, while antibiotic treatment can increase …

Same species, different diseases: how and why typhoidal and non-typhoidal Salmonella enterica serovars differ

O Gal-Mor, EC Boyle, GA Grassl - Frontiers in microbiology, 2014 - frontiersin.org
Human infections by the bacterial pathogen Salmonella enterica represent major disease
burdens worldwide. This highly ubiquitous species consists of more than 2600 different …

Salmonellae interactions with host processes

DL LaRock, A Chaudhary, SI Miller - Nature Reviews Microbiology, 2015 - nature.com
Salmonellae invasion and intracellular replication within host cells result in a range of
diseases, including gastroenteritis, bacteraemia, enteric fever and focal infections. In recent …

Salmonella enterica serovar Typhimurium skills to succeed in the host: virulence and regulation

A Fàbrega, J Vila - Clinical microbiology reviews, 2013 - Am Soc Microbiol
Salmonella enterica serovar Typhimurium is a primary enteric pathogen infecting both
humans and animals. Infection begins with the ingestion of contaminated food or water so …

Pathogenicity Factors of Genomic Islands in Intestinal and Extraintestinal Escherichia coli

M Desvaux, G Dalmasso, R Beyrouthy… - Frontiers in …, 2020 - frontiersin.org
Escherichia coli is a versatile bacterial species that includes both harmless commensal
strains and pathogenic strains found in the gastrointestinal tract in humans and warm …

An infection-relevant transcriptomic compendium for Salmonella enterica Serovar Typhimurium

C Kröger, A Colgan, S Srikumar, K Händler… - Cell host & …, 2013 - cell.com
Bacterial transcriptional networks consist of hundreds of transcription factors and thousands
of promoters. However, the true complexity of transcription in a bacterial pathogen and the …

Programmable removal of bacterial strains by use of genome-targeting CRISPR-Cas systems

AA Gomaa, HE Klumpe, ML Luo, K Selle, R Barrangou… - MBio, 2014 - Am Soc Microbiol
ABSTRACT CRISPR (clustered regularly interspaced short palindromic repeats)-Cas
(CRISPR-associated) systems in bacteria and archaea employ CRISPR RNAs to specifically …