The role of dynamic conformational ensembles in biomolecular recognition
Molecular recognition is central to all biological processes. For the past 50 years,
Koshland's' induced fit'hypothesis has been the textbook explanation for molecular …
Koshland's' induced fit'hypothesis has been the textbook explanation for molecular …
[HTML][HTML] NMR tools to detect protein allostery
Allostery is a fundamental mechanism of cellular homeostasis by intra-protein
communication between distinct functional sites. It is an internal process of proteins to steer …
communication between distinct functional sites. It is an internal process of proteins to steer …
Recognition dynamics up to microseconds revealed from an RDC-derived ubiquitin ensemble in solution
Protein dynamics are essential for protein function, and yet it has been challenging to
access the underlying atomic motions in solution on nanosecond-to-microsecond time …
access the underlying atomic motions in solution on nanosecond-to-microsecond time …
Structural biology by NMR: structure, dynamics, and interactions
The function of bio-macromolecules is determined by both their 3D structure and
conformational dynamics. These molecules are inherently flexible systems displaying a …
conformational dynamics. These molecules are inherently flexible systems displaying a …
Combining experimental and simulation data of molecular processes via augmented Markov models
Accurate mechanistic description of structural changes in biomolecules is an increasingly
important topic in structural and chemical biology. Markov models have emerged as a …
important topic in structural and chemical biology. Markov models have emerged as a …
The use of residual dipolar coupling in studying proteins by NMR
The development of residual dipolar coupling (RDC) in protein NMR spectroscopy, over a
decade ago, has become a useful and almost routine tool for accurate protein solution …
decade ago, has become a useful and almost routine tool for accurate protein solution …
Two-dimensional infrared spectroscopy of photoswitchable peptides
P Hamm, J Helbing, J Bredenbeck - Annu. Rev. Phys. Chem., 2008 - annualreviews.org
We present a detailed discussion of the complimentary fields of the application of two-
dimensional infrared (2D-IR) spectroscopy in comparison with two-dimensional nuclear …
dimensional infrared (2D-IR) spectroscopy in comparison with two-dimensional nuclear …
Understanding biomolecular motion, recognition, and allostery by use of conformational ensembles
We review the role conformational ensembles can play in the analysis of biomolecular
dynamics, molecular recognition, and allostery. We introduce currently available methods for …
dynamics, molecular recognition, and allostery. We introduce currently available methods for …
A dipicolinic acid tag for rigid lanthanide tagging of proteins and paramagnetic NMR spectroscopy
A new lanthanide tag was designed for site-specific labeling of proteins with paramagnetic
lanthanide ions. The tag, 4-mercaptomethyl-dipicolinic acid, binds lanthanide ions with …
lanthanide ions. The tag, 4-mercaptomethyl-dipicolinic acid, binds lanthanide ions with …
Conformational flexibility of a microcrystalline globular protein: order parameters by solid-state NMR spectroscopy
JL Lorieau, AE McDermott - Journal of the American Chemical …, 2006 - ACS Publications
The majority of protein structures are determined in the crystalline state, yet few methods
exist for the characterization of dynamics for crystalline biomolecules. Solid-state NMR can …
exist for the characterization of dynamics for crystalline biomolecules. Solid-state NMR can …