Enhancing sepsis biomarker development: key considerations from public and private perspectives

JF Llitjos, ED Carrol, MF Osuchowski, M Bonneville… - Critical Care, 2024 - Springer
Implementation of biomarkers in sepsis and septic shock in emergency situations, remains
highly challenging. This viewpoint arose from a public–private 3-day workshop aiming to …

Artificial intelligence-driven drug development against autoimmune diseases

P Moingeon - Trends in pharmacological sciences, 2023 - cell.com
Artificial intelligence (AI)-based predictive models are being used to foster a precision
medicine approach to treat complex chronic diseases such as autoimmune and …

Autoantibodies against type I IFNs in humans with alternative NF-κB pathway deficiency

T Le Voyer, AV Parent, X Liu, A Cederholm, A Gervais… - Nature, 2023 - nature.com
Patients with autoimmune polyendocrinopathy syndrome type 1 (APS-1) caused by
autosomal recessive AIRE deficiency produce autoantibodies that neutralize type I …

Human MCTS1-dependent translation of JAK2 is essential for IFN-γ immunity to mycobacteria

J Bohlen, Q Zhou, Q Philippot, M Ogishi, D Rinchai… - Cell, 2023 - cell.com
Human inherited disorders of interferon-gamma (IFN-γ) immunity underlie severe
mycobacterial diseases. We report X-linked recessive MCTS1 deficiency in men with …

Harnessing large language models (LLMs) for candidate gene prioritization and selection

M Toufiq, D Rinchai, E Bettacchioli, BSA Kabeer… - Journal of Translational …, 2023 - Springer
Background Feature selection is a critical step for translating advances afforded by systems-
scale molecular profiling into actionable clinical insights. While data-driven methods are …

High–temporal resolution profiling reveals distinct immune trajectories following the first and second doses of COVID-19 mRNA vaccines

D Rinchai, S Deola, G Zoppoli, BSA Kabeer… - Science …, 2022 - science.org
Knowledge of the mechanisms underpinning the development of protective immunity
conferred by mRNA vaccines is fragmentary. Here, we investigated responses to …

MX2: Identification and systematic mechanistic analysis of a novel immune-related biomarker for systemic lupus erythematosus

XW Meng, ZL Cheng, ZY Lu, YN Tan, XY Jia… - Frontiers in …, 2022 - frontiersin.org
Background Systemic lupus erythematosus (SLE) is an autoimmune disease that involves
multiple organs. However, the current SLE-related biomarkers still lack sufficient sensitivity …

Identification and clinical validation of hypoxia-inducible factor 1α protein as the potential biomarker in patients with sepsis

H Ruan, Y Li, Q Zhang, B Wang, R Wu, S Li, X Ran - Shock, 2023 - journals.lww.com
Objective: Sepsis is a complex disease characterized by an inflammatory response and
tissue hypoxia. Hypoxia-inducible factor 1α (HIF-1α) expression level is regulated by …

Entire expressed peripheral blood transcriptome in pediatric severe malarial anemia

SB Anyona, Q Cheng, SA Wasena, SW Osata… - Nature …, 2024 - nature.com
This study on severe malarial anemia (SMA: Hb< 6.0 g/dL), a leading global cause of
childhood morbidity and mortality, compares the entire expressed whole blood host …

Human-augmented large language model-driven selection of glutathione peroxidase 4 as a candidate blood transcriptional biomarker for circulating erythroid cells

B Subba, M Toufiq, F Omi, M Yurieva, T Khan… - Scientific Reports, 2024 - nature.com
The identification of optimal candidate genes from large-scale blood transcriptomic data is
crucial for develo** targeted assays to monitor immune responses. Here, we introduce a …