Genome-wide association studies of cancer: current insights and future perspectives

A Sud, B Kinnersley, RS Houlston - Nature Reviews Cancer, 2017 - nature.com
Genome-wide association studies (GWAS) provide an agnostic approach for investigating
the genetic basis of complex diseases. In oncology, GWAS of nearly all common …

The role of regulatory variation in complex traits and disease

FW Albert, L Kruglyak - Nature Reviews Genetics, 2015 - nature.com
We are in a phase of unprecedented progress in identifying genetic loci that cause variation
in traits ranging from growth and fitness in simple organisms to disease in humans …

Predicting the sequence specificities of DNA-and RNA-binding proteins by deep learning

B Alipanahi, A Delong, MT Weirauch, BJ Frey - Nature biotechnology, 2015 - nature.com
Knowing the sequence specificities of DNA-and RNA-binding proteins is essential for
develo** models of the regulatory processes in biological systems and for identifying …

Super-enhancers in the control of cell identity and disease

D Hnisz, BJ Abraham, TI Lee, A Lau, V Saint-André… - Cell, 2013 - cell.com
Super-enhancers are large clusters of transcriptional enhancers that drive expression of
genes that define cell identity. Improved understanding of the roles that super-enhancers …

Genome-wide association study identifies eight risk loci and implicates metabo-psychiatric origins for anorexia nervosa

HJ Watson, Z Yilmaz, LM Thornton, C Hübel… - Nature …, 2019 - nature.com
Characterized primarily by a low body-mass index, anorexia nervosa is a complex and
serious illness, affecting 0.9–4% of women and 0.3% of men,–, with twin-based heritability …

Insulated neighborhoods: structural and functional units of mammalian gene control

D Hnisz, DS Day, RA Young - Cell, 2016 - cell.com
Understanding how transcriptional enhancers control over 20,000 protein-coding genes to
maintain cell-type-specific gene expression programs in all human cells is a fundamental …

Aspirin and colorectal cancer: the promise of precision chemoprevention

DA Drew, Y Cao, AT Chan - Nature Reviews Cancer, 2016 - nature.com
Aspirin (acetylsalicylic acid) has become one of the most commonly used drugs, given its
role as an analgesic, antipyretic and agent for cardiovascular prophylaxis. Several decades …

Systematic localization of common disease-associated variation in regulatory DNA

MT Maurano, R Humbert, E Rynes, RE Thurman… - Science, 2012 - science.org
Genome-wide association studies have identified many noncoding variants associated with
common diseases and traits. We show that these variants are concentrated in regulatory …

[HTML][HTML] Single nucleotide polymorphisms and cancer susceptibility

NA Deng, H Zhou, H Fan, Y Yuan - Oncotarget, 2017 - ncbi.nlm.nih.gov
A large number of genes associated with various cancer types contain single nucleotide
polymorphisms (SNPs). SNPs are located in gene promoters, exons, introns as well as 5' …

MYC deregulation in primary human cancers

M Kalkat, J De Melo, KA Hickman, C Lourenco… - Genes, 2017 - mdpi.com
MYC regulates a complex biological program by transcriptionally activating and repressing
its numerous target genes. As such, MYC is a master regulator of many processes, including …