The expanding world of tRNA modifications and their disease relevance

T Suzuki - Nature Reviews Molecular Cell Biology, 2021 - nature.com
Transfer RNA (tRNA) is an adapter molecule that links a specific codon in mRNA with its
corresponding amino acid during protein synthesis. tRNAs are enzymatically modified post …

Naturally occurring modified ribonucleosides

PJ McCown, A Ruszkowska, CN Kunkler… - Wiley …, 2020 - Wiley Online Library
The chemical identity of RNA molecules beyond the four standard ribonucleosides has
fascinated scientists since pseudouridine was characterized as the “fifth” ribonucleotide in …

MODOMICS: a database of RNA modification pathways. 2017 update

P Boccaletto, MA Machnicka, E Purta… - Nucleic acids …, 2018 - academic.oup.com
MODOMICS is a database of RNA modifications that provides comprehensive information
concerning the chemical structures of modified ribonucleosides, their biosynthetic pathways …

FTO-mediated formation of N6-hydroxymethyladenosine and N6-formyladenosine in mammalian RNA

Y Fu, G Jia, X Pang, RN Wang, X Wang, CJ Li… - Nature …, 2013 - nature.com
N 6-methyladenosine is a prevalent internal modification in messenger RNA and non-
coding RNA affecting various cellular pathways. Here we report the discovery of two …

NAD captureSeq indicates NAD as a bacterial cap for a subset of regulatory RNAs

H Cahová, ML Winz, K Höfer, G Nübel, A Jäschke - Nature, 2015 - nature.com
A distinctive feature of prokaryotic gene expression is the absence of 5′-capped RNA. In
eukaryotes, 5′, 5′-triphosphate-linked 7-methylguanosine protects messenger RNA from …

Posttranscriptional RNA modifications: playing metabolic games in a cell's chemical Legoland

M Helm, JD Alfonzo - Chemistry & biology, 2014 - cell.com
Nature combines existing biochemical building blocks, at times with subtlety of purpose.
RNA modifications are a prime example of this, where standard RNA nucleosides are …

Bioorthogonal labeling and profiling of N6-isopentenyladenosine (i6A) modified RNA

Y Li, H Zhou, S Chen, Y Li, Y Guo, X Chen… - Nucleic Acids …, 2024 - academic.oup.com
Chemical modifications in RNAs play crucial roles in diversifying their structures and
regulating numerous biochemical processes. Since the 1990s, several hydrophobic prenyl …

Distribution and frequencies of post-transcriptional modifications in tRNAs

MA Machnicka, A Olchowik, H Grosjean, JM Bujnicki - RNA biology, 2014 - Taylor & Francis
Functional tRNA molecules always contain a wide variety of post-transcriptionally modified
nucleosides. These modifications stabilize tRNA structure, allow for proper interaction with …

Mechanistic insights into m6A RNA enzymes

T Lence, C Paolantoni, L Worpenberg… - Biochimica et Biophysica …, 2019 - Elsevier
The field of RNA modifications, so-called epitranscriptomics, has flourished over the past
years owing to improvements of detection methods and the identification of important …

Four billion years of microbial terpenome evolution

Y Hoshino, L Villanueva - FEMS microbiology reviews, 2023 - academic.oup.com
Terpenoids, also known as isoprenoids, are the largest and most diverse class of organic
compounds in nature and are involved in many membrane-associated cellular processes …