XAI-MethylMarker: Explainable AI approach for biomarker discovery for breast cancer subtype classification using methylation data

S Rajpal, A Rajpal, A Saggar, AK Vaid, V Kumar… - Expert Systems with …, 2023 - Elsevier
Breast cancer—a heterogeneous disease marked with a high mortality rate, necessitates
early diagnosis and treatment. The availability of multi-omic data has revolutionized our …

TRIM21 regulates virus-induced cell pyroptosis through polyubiquitination of ISG12a

M Guo, W Cao, S Chen, R Tian, B Xue… - The Journal of …, 2022 - journals.aai.org
Pyroptosis is a form of regulated cell death mediated by the gasdermin protein family. During
virus infection, cell pyroptosis restricts viral replication. The mechanisms of the tripartite motif …

The steroidal alkaloid tomatidine and tomatidine-rich tomato leaf extract suppress the human gastric cancer-derived 85As2 cells in vitro and in vivo via modulation of …

J Fujimaki, N Sayama, S Shiotani, T Suzuki, M Nonaka… - Nutrients, 2022 - mdpi.com
The steroidal alkaloid tomatidine is an aglycone of α-tomatine, which is abundant in tomato
leaves and has several biological activities. Tomatidine has been reported to inhibit the …

Anti-tumoral effect of chemerin on ovarian cancer cell lines mediated by activation of interferon alpha response

M Schmitt, J Gallistl, S Schüler-Toprak, J Fritsch… - Cancers, 2022 - mdpi.com
Simple Summary Chemerin is a multifunctional protein with an important role in the immune
system. Recent evidence showed that chemerin also regulates the development of cancer …

The novel protein ADAMTS16 promotes gastric carcinogenesis by targeting IFI27 through the NF-κb signaling pathway

T Li, J Zhou, Y Jiang, Y Zhao, J Huang, W Li… - International journal of …, 2022 - mdpi.com
A disintegrin and metalloproteinase with thrombospondin motifs 16 (ADAMTS16) has been
reported to be involved in the pathogenesis of solid cancers. However, its role in gastric …

A regulatory axis between epithelial splicing regulatory proteins and estrogen receptor α modulates the alternative transcriptome of luminal breast cancer

J Elhasnaoui, G Ferrero, V Miano, L Franchitti… - International Journal of …, 2022 - mdpi.com
Epithelial splicing regulatory proteins 1 and 2 (ESRP1/2) control the splicing pattern during
epithelial to mesenchymal transition (EMT) in a physiological context and in cancer …

Immune-related gene signatures to predict the effectiveness of chemoimmunotherapy in triple-negative breast cancer using exploratory subgroup discovery

O Kholod, WI Basket, JB Mitchem, JT Kaifi, RD Hammer… - Cancers, 2022 - mdpi.com
Simple Summary Chemoimmunotherapy combinations have transformed the treatment
landscape for patients with triple-negative breast cancer (TNBC). However, the discovery of …

Coptisine inhibits the malignancy of bladder carcinoma cells and regulates XPO1 expression

J Li, X Liu - Chemical Biology & Drug Design, 2023 - Wiley Online Library
This work is performed to investigate the effect of coptisine (COP) on the malignant
biological behaviors of bladder carcinoma cells and its underlying mechanism. Bladder …

Enhanced IFNα Signaling Promotes Ligand-Independent Activation of ERα to Promote Aromatase Inhibitor Resistance in Breast Cancer

TE Escher, P Dandawate, A Sayed, CR Hagan… - Cancers, 2021 - mdpi.com
Simple Summary Interferon alpha (IFNα) signaling is highly upregulated in ER+ breast
cancers that become resistant to estrogen deprivation therapy. This study uncovers how …

The inhibitory effect of trastuzumab on BT474 triple‑positive breast cancer cell viability is reversed by the combination of progesterone and estradiol

JA López-Méndez, JL Ventura-Gallegos… - Oncology …, 2023 - spandidos-publications.com
Breast cancer expressing the estrogen receptor (ER), progesterone receptor (PR) and
human epidermal growth factor receptor-2 (HER2) is known as triple-positive (TPBC). TPBC …