Hydrogel-tissue chemistry: principles and applications

V Gradinaru, J Treweek, K Overton… - Annual review of …, 2018 - annualreviews.org
Over the past five years, a rapidly develo** experimental approach has enabled high-
resolution and high-content information retrieval from intact multicellular animal (metazoan) …

Advances in ex situ tissue optical clearing

P Matryba, L Kaczmarek, J Gołąb - Laser & Photonics Reviews, 2019 - Wiley Online Library
Examination of whole organs with subcellular resolution in health, disease, and during
development is necessary to decipher their biological complexity. However, until recently …

3D imaging for driving cancer discovery

RL van Ineveld, EJ van Vliet, EJ Wehrens… - The EMBO …, 2022 - embopress.org
Our understanding of the cellular composition and architecture of cancer has primarily
advanced using 2D models and thin slice samples. This has granted spatial information on …

Multidimensional imaging of breast cancer

AC Rios, J van Rheenen… - Cold Spring …, 2022 - perspectivesinmedicine.cshlp.org
Breast cancer is a pathological condition characterized by high morphological and
molecular heterogeneity. Not only the breast cancer cells, but also their tumor micro …

An active texture-based digital atlas enables automated map** of structures and markers across brains

Y Chen, LE McElvain, AS Tolpygo, D Ferrante… - Nature …, 2019 - nature.com
Brain atlases enable the map** of labeled cells and projections from different brains onto
a standard coordinate system. We address two issues in the construction and use of atlases …

[HTML][HTML] Endoscopic imaging of white matter fiber tracts using polarization-sensitive optical coherence tomography

D DePaoli, DC Côté, BE Bouma, M Villiger - NeuroImage, 2022 - Elsevier
Polarization sensitive optical coherence tomography (PSOCT) has been shown to image
and delineate white matter fibers in a label-free manner by revealing optical birefringence …

Assessment of pathological features in Alzheimer's disease brain tissue with a large field-of-view visible-light optical coherence microscope

A Lichtenegger, M Muck, P Eugui, DJ Harper… - …, 2018 - spiedigitallibrary.org
We implemented a wide field-of-view visible-light optical coherence microscope (OCM) for
investigating ex-vivo brain tissue of patients diagnosed with Alzheimer's disease (AD) and of …

From superior contrast to super resolution label free optical microscopy

N Jayakumar, BS Ahluwalia - npj Imaging, 2025 - nature.com
Label-free optical microscopy utilizes the information encoded in light scattered off
unlabeled particles to generate the images. This review article starts off with a discussion on …

Probabilistic volumetric speckle suppression in OCT using deep learning

BR Chintada, S Ruiz-Lopera, R Restrepo… - Biomedical Optics …, 2024 - opg.optica.org
We present a deep learning framework for volumetric speckle reduction in optical coherence
tomography (OCT) based on a conditional generative adversarial network (cGAN) that …

Clearing techniques for visualizing the nervous system in development, injury, and disease

DDL Porter, PD Morton - Journal of neuroscience methods, 2020 - Elsevier
Modern clearing techniques enable high resolution visualization and 3D reconstruction of
cell populations and their structural details throughout large biological samples, including …